RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PLA2G4FQ68DD2 849 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 TPH2Q8IWU9 490 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 C4orf19Q8IY42 314 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 CLP1Q92989 425 aaKnown RBP19.3■□□□□ 0.68
PHRF1-204ENST00000532550 HLA-CQ95604 372 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 DYDC2Q96IM9 177 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 CEP170P1Q96L14 293 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 LXNQ9BS40 222 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 C11orf84Q9BUA3 381 aaPredicted RBP19.3■□□□□ 0.68
PHRF1-204ENST00000532550 GCOM2Q9BZD3 368 aaPredicted RBP19.3■□□□□ 0.68
PHRF1-204ENST00000532550 ZSWIM4Q9H7M6 989 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 TTC12Q9H892 705 aaPredicted RBP19.3■□□□□ 0.68
PHRF1-204ENST00000532550 RGL1Q9NZL6 768 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 SUCLA2Q9P2R7 463 aaPredicted RBP19.3■□□□□ 0.68
PHRF1-204ENST00000532550 COL4A6Q14031 1691 aa19.3■□□□□ 0.68
PHRF1-204ENST00000532550 VCANP13611 3396 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 C9IYK1 514 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 C5orf67F2Z3F1 127 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 DARSP14868 501 aaKnown RBP19.29■□□□□ 0.68
PHRF1-204ENST00000532550 YWHABP31946 246 aaKnown RBP19.29■□□□□ 0.68
PHRF1-204ENST00000532550 NPEPPSP55786 919 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 SPIRE1Q08AE8 756 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 DRP2Q13474 957 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 CTTNQ14247 550 aaKnown RBP19.29■□□□□ 0.68
PHRF1-204ENST00000532550 PAN2Q504Q3 1202 aaKnown RBP19.29■□□□□ 0.68
PHRF1-204ENST00000532550 RHPN2Q8IUC4 686 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 FBXO18Q8NFZ0 1043 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 SLC7A3Q8WY07 619 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 PLVAPQ9BX97 442 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 FOXP1Q9H334 677 aaPredicted RBP19.29■□□□□ 0.68
PHRF1-204ENST00000532550 ATP6V0A4Q9HBG4 840 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 PPME1Q9Y570 386 aa19.29■□□□□ 0.68
PHRF1-204ENST00000532550 COL4A4P53420 1690 aaPredicted RBP19.29■□□□□ 0.68
PHRF1-204ENST00000532550 SLITRK3O94933 977 aa19.28■□□□□ 0.68
PHRF1-204ENST00000532550 POLGP54098 1239 aaPredicted RBP19.28■□□□□ 0.68
PHRF1-204ENST00000532550 FAM189BP81408 668 aa19.28■□□□□ 0.68
PHRF1-204ENST00000532550 CYP4A11Q02928 519 aa19.28■□□□□ 0.68
PHRF1-204ENST00000532550 TFF2Q03403 129 aa19.28■□□□□ 0.68
PHRF1-204ENST00000532550 DSC3Q14574 896 aa19.28■□□□□ 0.68
PHRF1-204ENST00000532550 INO80BQ9C086 356 aaPredicted RBP19.28■□□□□ 0.68
PHRF1-204ENST00000532550 TMEM161AQ9NX61 479 aa19.28■□□□□ 0.68
PHRF1-204ENST00000532550 WRAP73Q9P2S5 460 aaPredicted RBP19.28■□□□□ 0.68
PHRF1-204ENST00000532550 MRPL42Q9Y6G3 142 aaKnown RBP19.28■□□□□ 0.68
PHRF1-204ENST00000532550 RALGAPA2Q2PPJ7 1873 aa19.28■□□□□ 0.68
PHRF1-204ENST00000532550 MYO7AQ13402 2215 aa19.28■□□□□ 0.68
PHRF1-204ENST00000532550 A0A087WZ62 844 aa19.27■□□□□ 0.68
PHRF1-204ENST00000532550 LINC00271P0C7V0 271 aa19.27■□□□□ 0.68
PHRF1-204ENST00000532550 MCM7P33993 719 aa19.27■□□□□ 0.68
PHRF1-204ENST00000532550 RFC5P40937 340 aa19.27■□□□□ 0.68
PHRF1-204ENST00000532550 GATMP50440 423 aa19.27■□□□□ 0.68
PHRF1-204ENST00000532550 XKR9Q5GH70 373 aa19.27■□□□□ 0.68
PHRF1-204ENST00000532550 FAM102BQ5T8I3 360 aa19.27■□□□□ 0.68
PHRF1-204ENST00000532550 ZNF410Q86VK4 478 aa19.27■□□□□ 0.68
PHRF1-204ENST00000532550 MTMR9Q96QG7 549 aa19.27■□□□□ 0.68
PHRF1-204ENST00000532550 EIF2AK1Q9BQI3 630 aaKnown RBP19.27■□□□□ 0.68
PHRF1-204ENST00000532550 FDXACB1Q9BRP7 624 aaPredicted RBP19.27■□□□□ 0.68
PHRF1-204ENST00000532550 ELAC1Q9H777 363 aaKnown RBP19.27■□□□□ 0.68
PHRF1-204ENST00000532550 SPTBN5Q9NRC6 3674 aaKnown RBP19.27■□□□□ 0.67
PHRF1-204ENST00000532550 TBKBP1A7MCY6 615 aa19.26■□□□□ 0.67
PHRF1-204ENST00000532550 WNT7AO00755 349 aa19.26■□□□□ 0.67
PHRF1-204ENST00000532550 CSDE1O75534 798 aaKnown RBP19.26■□□□□ 0.67
PHRF1-204ENST00000532550 FGFR4P22455 802 aa19.26■□□□□ 0.67
PHRF1-204ENST00000532550 TIGD5Q53EQ6 642 aa19.26■□□□□ 0.67
PHRF1-204ENST00000532550 NAALADL2Q58DX5 795 aa19.26■□□□□ 0.67
PHRF1-204ENST00000532550 SPOUT1Q5T280 376 aaKnown RBP19.26■□□□□ 0.67
PHRF1-204ENST00000532550 ZNF579Q8NAF0 562 aaKnown RBP19.26■□□□□ 0.67
PHRF1-204ENST00000532550 HSD17B14Q9BPX1 270 aa19.26■□□□□ 0.67
PHRF1-204ENST00000532550 LMAN2LQ9H0V9 348 aa19.26■□□□□ 0.67
PHRF1-204ENST00000532550 DHX33Q9H6R0 707 aaKnown RBP19.26■□□□□ 0.67
PHRF1-204ENST00000532550 DACT1Q9NYF0 836 aa19.26■□□□□ 0.67
PHRF1-204ENST00000532550 TTC28Q96AY4 2481 aa19.26■□□□□ 0.67
PHRF1-204ENST00000532550 BRWD1Q9NSI6 2320 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 REV3LO60673 3130 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 ZBTB39O15060 712 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 GRM6O15303 877 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 SFPQP23246 707 aaKnown RBP eCLIP19.25■□□□□ 0.67
PHRF1-204ENST00000532550 ZNF174Q15697 407 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 KSR1Q8IVT5 923 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 NEK9Q8TD19 979 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 TCP11Q8WWU5 503 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 P2RX5Q93086 422 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 NLRP4Q96MN2 994 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 ALG13Q9NP73 1137 aaKnown RBP19.25■□□□□ 0.67
PHRF1-204ENST00000532550 CHST12Q9NRB3 414 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 AAASQ9NRG9 546 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 PLAGL2Q9UPG8 496 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 KIF3AQ9Y496 699 aa19.25■□□□□ 0.67
PHRF1-204ENST00000532550 ASAP2O43150 1006 aa19.24■□□□□ 0.67
PHRF1-204ENST00000532550 HOXA2O43364 376 aa19.24■□□□□ 0.67
PHRF1-204ENST00000532550 GAS2O43903 313 aaKnown RBP19.24■□□□□ 0.67
PHRF1-204ENST00000532550 ORC2Q13416 577 aaPredicted RBP19.24■□□□□ 0.67
PHRF1-204ENST00000532550 NOSTRINQ8IVI9 506 aa19.24■□□□□ 0.67
PHRF1-204ENST00000532550 PRPF31Q8WWY3 499 aaKnown RBP19.24■□□□□ 0.67
PHRF1-204ENST00000532550 PSPC1Q8WXF1 523 aaKnown RBP19.24■□□□□ 0.67
PHRF1-204ENST00000532550 TMEM143Q96AN5 459 aa19.24■□□□□ 0.67
PHRF1-204ENST00000532550 CCDC43Q96MW1 224 aaKnown RBP19.24■□□□□ 0.67
PHRF1-204ENST00000532550 TMEM60Q9H2L4 133 aa19.24■□□□□ 0.67
PHRF1-204ENST00000532550 NSUN3Q9H649 340 aaKnown RBP19.24■□□□□ 0.67
PHRF1-204ENST00000532550 NOL7Q9UMY1 257 aaKnown RBP19.24■□□□□ 0.67
PHRF1-204ENST00000532550 PCDHB12Q9Y5F1 795 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms