RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 RHPN2Q8IUC4 686 aa16.2■□□□□ 0.18
CTSB-224ENST00000532392 IGSF22Q8N9C0 903 aa16.2■□□□□ 0.18
CTSB-224ENST00000532392 PIGOQ8TEQ8 1089 aa16.2■□□□□ 0.18
CTSB-224ENST00000532392 LINC01599Q8WXQ3 324 aa16.2■□□□□ 0.18
CTSB-224ENST00000532392 NACC1Q96RE7 527 aa16.2■□□□□ 0.18
CTSB-224ENST00000532392 TSPYL2Q9H2G4 693 aaPredicted RBP16.2■□□□□ 0.18
CTSB-224ENST00000532392 STK24Q9Y6E0 443 aa16.2■□□□□ 0.18
CTSB-224ENST00000532392 GBF1Q92538 1859 aa16.2■□□□□ 0.18
CTSB-224ENST00000532392 PTPRSQ13332 1948 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 A0A087WWV3 80 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 LCHNA4D1U4 455 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 ARHGEF15O94989 841 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 EMC2Q15006 297 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 IL17AQ16552 155 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 FERMT3Q86UX7 667 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 ZNF410Q86VK4 478 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 TCP11Q8WWU5 503 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 PSPC1Q8WXF1 523 aaKnown RBP16.19■□□□□ 0.18
CTSB-224ENST00000532392 MYLIPQ8WY64 445 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 TMEM143Q96AN5 459 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 CCDC43Q96MW1 224 aaKnown RBP16.19■□□□□ 0.18
CTSB-224ENST00000532392 YME1L1Q96TA2 773 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 MTRQ99707 1265 aa16.19■□□□□ 0.18
CTSB-224ENST00000532392 GCOM2Q9BZD3 368 aaPredicted RBP16.19■□□□□ 0.18
CTSB-224ENST00000532392 BMP2KQ9NSY1 1161 aaPredicted RBP16.19■□□□□ 0.18
CTSB-224ENST00000532392 LOXHD1Q8IVV2 1947 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 A0A087WZ62 844 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 ASAP2O43150 1006 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 MGEA5O60502 916 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 DGAT1O75907 488 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 CCT6AP40227 531 aaKnown RBP16.18■□□□□ 0.18
CTSB-224ENST00000532392 ARL6IP4Q66PJ3 421 aaKnown RBP16.18■□□□□ 0.18
CTSB-224ENST00000532392 POTEGQ6S5H5 508 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 KSR1Q8IVT5 923 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 SP7Q8TDD2 431 aaPredicted RBP16.18■□□□□ 0.18
CTSB-224ENST00000532392 PRPF31Q8WWY3 499 aaKnown RBP16.18■□□□□ 0.18
CTSB-224ENST00000532392 NLRP4Q96MN2 994 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 ADAM2Q99965 735 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 FDXACB1Q9BRP7 624 aaPredicted RBP16.18■□□□□ 0.18
CTSB-224ENST00000532392 INO80BQ9C086 356 aaPredicted RBP16.18■□□□□ 0.18
CTSB-224ENST00000532392 PRDM12Q9H4Q4 367 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 XPNPEP1Q9NQW7 623 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 RGS18Q9NS28 235 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 DBR1Q9UK59 544 aaKnown RBP16.18■□□□□ 0.18
CTSB-224ENST00000532392 COL4A3BPQ9Y5P4 624 aa16.18■□□□□ 0.18
CTSB-224ENST00000532392 DENND3A2RUS2 1198 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 LINC01553A4QN01 128 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 BMP15O95972 392 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 ECM1Q16610 540 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 KRT79Q5XKE5 535 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 NPAS4Q8IUM7 802 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 CRIPAKQ8N1N5 446 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 SNX29Q8TEQ0 813 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 ATP6V0A4Q9HBG4 840 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 C1orf112Q9NSG2 853 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 MTMR6Q9Y217 621 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 MYO9BQ13459 2157 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 CDH23Q9H251 3354 aa16.17■□□□□ 0.18
CTSB-224ENST00000532392 TTC3P53804 2025 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 STX6O43752 255 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 CSDE1O75534 798 aaKnown RBP16.16■□□□□ 0.18
CTSB-224ENST00000532392 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
CTSB-224ENST00000532392 STAG3L1P0CL83 205 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 SRGAP2CP0DJJ0 459 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 FOSL2P15408 326 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 ZSCAN20P17040 1043 aaPredicted RBP16.16■□□□□ 0.18
CTSB-224ENST00000532392 FGFR4P22455 802 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 SARSP49591 514 aaKnown RBP16.16■□□□□ 0.18
CTSB-224ENST00000532392 LAMTOR4Q0VGL1 99 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 RESTQ13127 1097 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 DSC3Q14574 896 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 MXD4Q14582 209 aaPredicted RBP16.16■□□□□ 0.18
CTSB-224ENST00000532392 SLC24A5Q71RS6 500 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 ARNTL2Q8WYA1 636 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 TGS1Q96RS0 853 aaKnown RBP16.16■□□□□ 0.18
CTSB-224ENST00000532392 GAS2L1Q99501 681 aaPredicted RBP16.16■□□□□ 0.18
CTSB-224ENST00000532392 CERS4Q9HA82 394 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 IFT122Q9HBG6 1241 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
CTSB-224ENST00000532392 KIAA1024Q9UPX6 916 aa16.16■□□□□ 0.18
CTSB-224ENST00000532392 PP2D1A8MPX8 630 aa16.15■□□□□ 0.18
CTSB-224ENST00000532392 C9IYK1 514 aa16.15■□□□□ 0.18
CTSB-224ENST00000532392 USO1O60763 962 aaKnown RBP16.15■□□□□ 0.18
CTSB-224ENST00000532392 DGKIO75912 1065 aa16.15■□□□□ 0.18
CTSB-224ENST00000532392 SFPQP23246 707 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTSB-224ENST00000532392 CDC25AP30304 524 aa16.15■□□□□ 0.18
CTSB-224ENST00000532392 SF3A1Q15459 793 aaKnown RBP16.15■□□□□ 0.18
CTSB-224ENST00000532392 SPRED2Q7Z698 418 aa16.15■□□□□ 0.18
CTSB-224ENST00000532392 SRGAP1Q7Z6B7 1085 aa16.15■□□□□ 0.18
CTSB-224ENST00000532392 ZNF689Q96CS4 500 aaPredicted RBP16.15■□□□□ 0.18
CTSB-224ENST00000532392 LRFN2Q9ULH4 789 aa16.15■□□□□ 0.18
CTSB-224ENST00000532392 PCDHB7Q9Y5E2 793 aa16.15■□□□□ 0.18
CTSB-224ENST00000532392 ARHGEF35A5YM69 484 aa16.14■□□□□ 0.17
CTSB-224ENST00000532392 VWA3AA6NCI4 1184 aa16.14■□□□□ 0.17
CTSB-224ENST00000532392 ARL2P36404 184 aa16.14■□□□□ 0.17
CTSB-224ENST00000532392 ERVK-21P61565 698 aa16.14■□□□□ 0.17
CTSB-224ENST00000532392 FAM189BP81408 668 aa16.14■□□□□ 0.17
CTSB-224ENST00000532392 POU5F1BQ06416 359 aa16.14■□□□□ 0.17
CTSB-224ENST00000532392 RNF149Q8NC42 400 aa16.14■□□□□ 0.17
CTSB-224ENST00000532392 MCPH1Q8NEM0 835 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms