RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 NUDT18Q6ZVK8 323 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 ADAT2Q7Z6V5 191 aaKnown RBP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 PCSK9Q8NBP7 692 aaKnown RBP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 CCNYQ8ND76 341 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 CHAMP1Q96JM3 812 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 AGBL1Q96MI9 1066 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 POTEFA5A3E0 1075 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 LARGE1O95461 756 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 POTEIP0CG38 1075 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 TROVE2P10155 538 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 CYP2C9P11712 490 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 INPP5BP32019 993 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 TOB2Q14106 344 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 MAP7Q14244 749 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 MXD4Q14582 209 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 POTEEQ6S8J3 1075 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 UNC13DQ70J99 1090 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 CCDC13Q8IYE1 715 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 AFG1LQ8WV93 481 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 ARHGEF2Q92974 986 aaKnown RBP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 ERAP1Q9NZ08 941 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 TRIM17Q9Y577 477 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 RRN3P2A6NIE6 340 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 HGSO14964 777 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 RESTQ13127 1097 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 DEFB115Q30KQ5 88 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 MGARPQ8TDB4 240 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 PPP4R1Q8TF05 950 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 RILPQ96NA2 401 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 ACAP3Q96P50 834 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 EIF3CLB5ME19 914 aaKnown RBP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 TRPA1O75762 1119 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 PDHBP11177 359 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 ARHGAP25P42331 645 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 EPHB1P54762 984 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 FAM83AQ86UY5 434 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 PARD3BQ8TEW8 1205 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 EXOC4Q96A65 974 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 EIF3CQ99613 913 aaKnown RBP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 SEL1LQ9UBV2 794 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 KIF1AQ12756 1690 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 A0A087WWV3 80 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 ZWINTO95229 277 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 PRKCBP05771 671 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 NNMTP40261 264 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 GTF2A1P52655 376 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 XRRA1Q6P2D8 792 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 EFCAB13Q8IY85 973 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 C10orf67Q8IYJ2 551 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 NDUFAF2Q8N183 169 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 RSRC1Q96IZ7 334 aaKnown RBP12.16□□□□□ -0.46
PTPRK-221ENST00000532331 THAP9Q9H5L6 903 aa12.16□□□□□ -0.46
PTPRK-221ENST00000532331 MAFGO15525 162 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 PRPSAP2O60256 369 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 RBL2Q08999 1139 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 SRBD1Q8N5C6 995 aaKnown RBP12.15□□□□□ -0.46
PTPRK-221ENST00000532331 OXER1Q8TDS5 423 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 AAASQ9NRG9 546 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 DONSONQ9NYP3 566 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 PCDHB7Q9Y5E2 793 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 C17orf102A2RUQ5 167 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 STXBP3O00186 592 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 CD2BP2O95400 341 aaKnown RBP12.15□□□□□ -0.46
PTPRK-221ENST00000532331 ZNF18P17022 549 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 ENOX1Q8TC92 643 aaKnown RBP12.15□□□□□ -0.46
PTPRK-221ENST00000532331 NCAPGQ9BPX3 1015 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 RABEP2Q9H5N1 569 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 TUFT1Q9NNX1 390 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 GOLGA8KD6RF30 607 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 CXCL11O14625 94 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 GLB1LQ6UWU2 654 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 CDCA5Q96FF9 252 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 IL1R1P14778 569 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 PPARDQ03181 441 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTPRK-221ENST00000532331 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 TTC1Q99614 292 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
PTPRK-221ENST00000532331 ADGRB1O14514 1584 aa12.15□□□□□ -0.47
PTPRK-221ENST00000532331 NFIAQ12857 509 aa12.15□□□□□ -0.47
PTPRK-221ENST00000532331 TSTA3Q13630 321 aaPredicted RBP12.15□□□□□ -0.47
PTPRK-221ENST00000532331 C11orf57Q6ZUT1 292 aaPredicted RBP12.15□□□□□ -0.47
PTPRK-221ENST00000532331 ERICH1Q86X53 443 aa12.15□□□□□ -0.47
PTPRK-221ENST00000532331 ATP11BQ9Y2G3 1177 aa12.15□□□□□ -0.47
PTPRK-221ENST00000532331 DGAT1O75907 488 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 GFPT2O94808 682 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 BFSP2Q13515 415 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 SMAP1Q8IYB5 467 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-221ENST00000532331 RICTORQ6R327 1708 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 STAG3L1P0CL83 205 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 KRT17Q04695 432 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 TMEM62Q0P6H9 643 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 TTC39CQ8N584 583 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 CACYBPQ9HB71 228 aaKnown RBP12.14□□□□□ -0.47
PTPRK-221ENST00000532331 STRIP2Q9ULQ0 834 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 ZNF609O15014 1411 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 ZNF500O60304 480 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms