RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 LEO1Q8WVC0 666 aaPredicted RBP5.9□□□□□ -1.46
USP47-211ENST00000531513 NEU4Q8WWR8 484 aaPredicted RBP5.9□□□□□ -1.46
USP47-211ENST00000531513 CCDC136Q96JN2 1154 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 C8orf48Q96LL4 319 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 TRIM39Q9HCM9 518 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 INCENPQ9NQS7 918 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 TLR9Q9NR96 1032 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 SFMBT1Q9UHJ3 866 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 PUF60Q9UHX1 559 aaKnown RBP5.9□□□□□ -1.46
USP47-211ENST00000531513 FBXO10Q9UK96 956 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 PCDHA8Q9Y5H6 950 aa5.9□□□□□ -1.46
USP47-211ENST00000531513 EFCAB14O75071 495 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 KRT15P19012 456 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 POU3F2P20265 443 aaPredicted RBP5.89□□□□□ -1.47
USP47-211ENST00000531513 GJA4P35212 333 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 EPHB1P54762 984 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 TTF1Q15361 905 aaPredicted RBP5.89□□□□□ -1.47
USP47-211ENST00000531513 STILQ15468 1287 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 USP30Q70CQ3 517 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 CXXC5Q7LFL8 322 aaKnown RBP5.89□□□□□ -1.47
USP47-211ENST00000531513 MTDHQ86UE4 582 aaKnown RBP5.89□□□□□ -1.47
USP47-211ENST00000531513 GSTCDQ8NEC7 633 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 GALNT8Q9NY28 637 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 BTBD7Q9P203 1132 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 GABBR1Q9UBS5 961 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 CDC42EP3Q9UKI2 254 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 CBLCQ9ULV8 474 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 PHLDB1Q86UU1 1377 aa5.89□□□□□ -1.47
USP47-211ENST00000531513 PRAMEF25A6NGN4 478 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 C4BPAP04003 597 aaKnown RBP5.88□□□□□ -1.47
USP47-211ENST00000531513 ASLP04424 464 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 PYGMP11217 842 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 PDE6AP16499 860 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 TGM1P22735 817 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 INHBCP55103 352 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 TUBA3CQ13748 450 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 EIF4HQ15056 248 aaKnown RBP5.88□□□□□ -1.47
USP47-211ENST00000531513 PCOLCEQ15113 449 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 PCBP1Q15365 356 aaKnown RBP eCLIP5.88□□□□□ -1.47
USP47-211ENST00000531513 NFE2Q16621 373 aaPredicted RBP5.88□□□□□ -1.47
USP47-211ENST00000531513 FNDC7Q5VTL7 733 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 TUBA3EQ6PEY2 450 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 C16orf59Q7L2K0 433 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 OTOP2Q7RTS6 562 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 BRAPQ7Z569 592 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 OSTM1Q86WC4 334 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 GPR135Q8IZ08 494 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 FBXW5Q969U6 566 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 MTFR1LQ9H019 292 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 SLC52A2Q9HAB3 445 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 MSL2Q9HCI7 577 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 CATSPERZQ9NTU4 200 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 NDOR1Q9UHB4 597 aa5.88□□□□□ -1.47
USP47-211ENST00000531513 TNPO3Q9Y5L0 923 aaKnown RBP5.88□□□□□ -1.47
USP47-211ENST00000531513 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.87□□□□□ -1.47
USP47-211ENST00000531513 PLEKHD1A6NEE1 506 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 ZNF561-AS1K7EIQ3 104 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 KCNK3O14649 394 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 PRC1O43663 620 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 KATNA1O75449 491 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 MPIG6BO95866 241 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 NAT1P18440 290 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 HIBADHP31937 336 aaKnown RBP5.87□□□□□ -1.47
USP47-211ENST00000531513 NEK4P51957 841 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 TBX4P57082 545 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 JAM2P57087 298 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 GUCY1A3Q02108 690 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 STRN3Q13033 797 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 DHCR24Q15392 516 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 LRSAM1Q6UWE0 723 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 NECAB2Q7Z6G3 386 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 LDLRAD3Q86YD5 345 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 CCAR1Q8IX12 1150 aaKnown RBP5.87□□□□□ -1.47
USP47-211ENST00000531513 OR14K1Q8NGZ2 314 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 ZNF483Q8TF39 744 aaPredicted RBP5.87□□□□□ -1.47
USP47-211ENST00000531513 TSR2Q969E8 191 aaKnown RBP5.87□□□□□ -1.47
USP47-211ENST00000531513 WNK4Q96J92 1243 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 AMNQ9BXJ7 453 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 OR10A2Q9H208 303 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 MMRN2Q9H8L6 949 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 PLA2G3Q9NZ20 509 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 RIPOR2Q9Y4F9 1068 aa5.87□□□□□ -1.47
USP47-211ENST00000531513 A0A087X1B8 175 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 TPD52L2O43399 206 aaKnown RBP5.86□□□□□ -1.47
USP47-211ENST00000531513 TSPAN6O43657 245 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 OPA1O60313 960 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 RASGRP1O95267 797 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 CRTAMO95727 393 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 ADH4P08319 380 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 MRE11P49959 708 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 CD83Q01151 205 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 RNF219Q5W0B1 726 aaPredicted RBP5.86□□□□□ -1.47
USP47-211ENST00000531513 KANK2Q63ZY3 851 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 TRIM68Q6AZZ1 485 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 EP400NLQ6ZTU2 488 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 FGD2Q7Z6J4 655 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 CCDC146Q8IYE0 955 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 WDR66Q8TBY9 1149 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 SCLYQ96I15 445 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 PSMD1Q99460 953 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms