RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 GPC3P51654 580 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 ZP2Q05996 745 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 CLUL1Q15846 466 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 INF2Q27J81 1249 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 ZNF668Q96K58 619 aaPredicted RBP17.77■□□□□ 0.44
CPSF1-205ENST00000531042 CEP89Q96ST8 783 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 PHF20Q9BVI0 1012 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 CWH43Q9H720 699 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 HCSTQ9UBK5 93 aa17.77■□□□□ 0.44
CPSF1-205ENST00000531042 SEPT9Q9UHD8 586 aaPredicted RBP17.77■□□□□ 0.44
CPSF1-205ENST00000531042 DARSP14868 501 aaKnown RBP17.76■□□□□ 0.43
CPSF1-205ENST00000531042 UBE3AQ05086 875 aa17.76■□□□□ 0.43
CPSF1-205ENST00000531042 SMAD2Q15796 467 aaKnown RBP17.76■□□□□ 0.43
CPSF1-205ENST00000531042 MTERF2Q49AM1 385 aa17.76■□□□□ 0.43
CPSF1-205ENST00000531042 XKR3Q5GH77 459 aa17.76■□□□□ 0.43
CPSF1-205ENST00000531042 ADHFE1Q8IWW8 467 aa17.76■□□□□ 0.43
CPSF1-205ENST00000531042 EFHBQ8N7U6 833 aa17.76■□□□□ 0.43
CPSF1-205ENST00000531042 COLGALT1Q8NBJ5 622 aa17.76■□□□□ 0.43
CPSF1-205ENST00000531042 TMEM117Q9H0C3 514 aa17.76■□□□□ 0.43
CPSF1-205ENST00000531042 SLKQ9H2G2 1235 aaPredicted RBP17.76■□□□□ 0.43
CPSF1-205ENST00000531042 DDX25Q9UHL0 483 aaKnown RBP17.76■□□□□ 0.43
CPSF1-205ENST00000531042 TMEM150BA6NC51 233 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 HOXA2O43364 376 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 SLC37A4O43826 429 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 PFKFB2O60825 505 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 FGF18O76093 207 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 NRIP1P48552 1158 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 DRP2Q13474 957 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 CSPP1Q1MSJ5 1256 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 ECHDC2Q86YB7 292 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 NLRP7Q8WX94 980 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 MSLNLQ96KJ4 702 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 CASD1Q96PB1 797 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 RNF19AQ9NV58 838 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 CD207Q9UJ71 328 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 TPCN1Q9ULQ1 816 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 PCDHGC5Q9Y5F6 944 aa17.75■□□□□ 0.43
CPSF1-205ENST00000531042 STK36Q9NRP7 1315 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 IGKV6-21A0A0C4DH24 114 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 CCDC194A0A1B0GVG4 234 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 FAM86C2PA6NEL3 165 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 ALADP13716 330 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 LAG3P18627 525 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 FGFR4P22455 802 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 NDUFV1P49821 464 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 CDC42EP1Q00587 391 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 SMAD4Q13485 552 aaKnown RBP17.74■□□□□ 0.43
CPSF1-205ENST00000531042 LETM2Q2VYF4 491 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 LRRC55Q6ZSA7 311 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 RBM23Q86U06 439 aaKnown RBP17.74■□□□□ 0.43
CPSF1-205ENST00000531042 THNSL1Q8IYQ7 743 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 MICAL1Q8TDZ2 1067 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 SCLT1Q96NL6 688 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 SH2D3AQ9BRG2 576 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 TLR9Q9NR96 1032 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 CLEC1BQ9P126 229 aa17.74■□□□□ 0.43
CPSF1-205ENST00000531042 DDX11L8A8MPP1 907 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 EML1O00423 815 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 DTNBO60941 627 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 MAFO75444 373 aaPredicted RBP17.73■□□□□ 0.43
CPSF1-205ENST00000531042 EYA4O95677 639 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 XBP1P17861 261 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 DNM2P50570 870 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 ANAPC15P60006 121 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 ERVFC1P60507 584 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 PSMC5P62195 406 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 PPP2R5CQ13362 524 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 PPP4R3AQ6IN85 833 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 ANO5Q75V66 913 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 NEK8Q86SG6 692 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 FAM20AQ96MK3 541 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 GCOM2Q9BZD3 368 aaPredicted RBP17.73■□□□□ 0.43
CPSF1-205ENST00000531042 TLE6Q9H808 572 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 KCNMB3Q9NPA1 279 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 GJB4Q9NTQ9 266 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 VAV3Q9UKW4 847 aa17.73■□□□□ 0.43
CPSF1-205ENST00000531042 A0A087WZ62 844 aa17.72■□□□□ 0.43
CPSF1-205ENST00000531042 A0A0U1RQF3 1178 aa17.72■□□□□ 0.43
CPSF1-205ENST00000531042 CSDE1O75534 798 aaKnown RBP17.72■□□□□ 0.43
CPSF1-205ENST00000531042 CTDNEP1O95476 244 aa17.72■□□□□ 0.43
CPSF1-205ENST00000531042 GLP2RO95838 553 aa17.72■□□□□ 0.43
CPSF1-205ENST00000531042 EOMESO95936 686 aa17.72■□□□□ 0.43
CPSF1-205ENST00000531042 GCFC2P16383 781 aaKnown RBP17.72■□□□□ 0.43
CPSF1-205ENST00000531042 PLCB3Q01970 1234 aa17.72■□□□□ 0.43
CPSF1-205ENST00000531042 PDE12Q6L8Q7 609 aaKnown RBP17.72■□□□□ 0.43
CPSF1-205ENST00000531042 ZNF598Q86UK7 904 aaKnown RBP17.72■□□□□ 0.43
CPSF1-205ENST00000531042 ABI1Q8IZP0 508 aa17.72■□□□□ 0.43
CPSF1-205ENST00000531042 OXER1Q8TDS5 423 aa17.72■□□□□ 0.43
CPSF1-205ENST00000531042 POP1Q99575 1024 aaKnown RBP17.72■□□□□ 0.43
CPSF1-205ENST00000531042 FDXACB1Q9BRP7 624 aaPredicted RBP17.72■□□□□ 0.43
CPSF1-205ENST00000531042 DACT1Q9NYF0 836 aa17.72■□□□□ 0.43
CPSF1-205ENST00000531042 SUCLA2Q9P2R7 463 aaPredicted RBP17.72■□□□□ 0.43
CPSF1-205ENST00000531042 LZTS1Q9Y250 596 aa17.72■□□□□ 0.43
CPSF1-205ENST00000531042 FSCN2O14926 492 aa17.71■□□□□ 0.43
CPSF1-205ENST00000531042 PER2O15055 1255 aa17.71■□□□□ 0.43
CPSF1-205ENST00000531042 DCXO43602 365 aa17.71■□□□□ 0.43
CPSF1-205ENST00000531042 QARSP47897 775 aaKnown RBP17.71■□□□□ 0.43
CPSF1-205ENST00000531042 AK2P54819 239 aa17.71■□□□□ 0.43
CPSF1-205ENST00000531042 COASYQ13057 564 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms