RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 LARP4BQ92615 738 aaKnown RBP23.7■■□□□ 1.38
CAPN1-220ENST00000530567 PPP1R16BQ96T49 567 aa23.7■■□□□ 1.38
CAPN1-220ENST00000530567 ADAMTS10Q9H324 1103 aa23.7■■□□□ 1.38
CAPN1-220ENST00000530567 CDHR5Q9HBB8 845 aa23.7■■□□□ 1.38
CAPN1-220ENST00000530567 TRPV2Q9Y5S1 764 aa23.7■■□□□ 1.38
CAPN1-220ENST00000530567 SSBP05455 408 aaKnown RBP eCLIP23.69■■□□□ 1.38
CAPN1-220ENST00000530567 ARL2P36404 184 aa23.69■■□□□ 1.38
CAPN1-220ENST00000530567 STAT6P42226 847 aa23.69■■□□□ 1.38
CAPN1-220ENST00000530567 GPC3P51654 580 aa23.69■■□□□ 1.38
CAPN1-220ENST00000530567 MDM2Q00987 491 aaPredicted RBP23.69■■□□□ 1.38
CAPN1-220ENST00000530567 KIZQ2M2Z5 673 aa23.69■■□□□ 1.38
CAPN1-220ENST00000530567 ARSHQ5FYA8 562 aa23.69■■□□□ 1.38
CAPN1-220ENST00000530567 IER5Q5VY09 327 aa23.69■■□□□ 1.38
CAPN1-220ENST00000530567 TMEM87AQ8NBN3 555 aa23.69■■□□□ 1.38
CAPN1-220ENST00000530567 CELF4Q9BZC1 486 aaKnown RBP23.69■■□□□ 1.38
CAPN1-220ENST00000530567 FAM13BQ9NYF5 915 aa23.69■■□□□ 1.38
CAPN1-220ENST00000530567 A0A1B0GVL5 298 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 PFKFB1P16118 471 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 DNM2P50570 870 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 EPHB4P54760 987 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 NLRP11P59045 1033 aaKnown RBP23.68■■□□□ 1.38
CAPN1-220ENST00000530567 MAEAQ7L5Y9 396 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 KSR1Q8IVT5 923 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 TMEM199Q8N511 208 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 ASAP3Q8TDY4 903 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 TCP11Q8WWU5 503 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 PRPF31Q8WWY3 499 aaKnown RBP23.68■■□□□ 1.38
CAPN1-220ENST00000530567 PSPC1Q8WXF1 523 aaKnown RBP23.68■■□□□ 1.38
CAPN1-220ENST00000530567 ZNF668Q96K58 619 aaPredicted RBP23.68■■□□□ 1.38
CAPN1-220ENST00000530567 POLR3FQ9H1D9 316 aaPredicted RBP23.68■■□□□ 1.38
CAPN1-220ENST00000530567 GOLPH3LQ9H4A5 285 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 KCNH3Q9ULD8 1083 aa23.68■■□□□ 1.38
CAPN1-220ENST00000530567 CXCL10P02778 98 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 GUCY2CP25092 1073 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 FPGSQ05932 587 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 MAPK7Q13164 816 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 FBXO47Q5MNV8 452 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 RHPN2Q8IUC4 686 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 DAW1Q8N136 415 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 TMEM40Q8WWA1 233 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 DHX58Q96C10 678 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 LBHD1Q9BQE6 289 aaPredicted RBP23.67■■□□□ 1.38
CAPN1-220ENST00000530567 COL4A3BPQ9Y5P4 624 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 POLR2DO15514 142 aaKnown RBP23.67■■□□□ 1.38
CAPN1-220ENST00000530567 PARNO95453 639 aaKnown RBP23.67■■□□□ 1.38
CAPN1-220ENST00000530567 GLRA2P23416 452 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 RFC2P35250 354 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 LAMTOR4Q0VGL1 99 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 GPBP1Q86WP2 473 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 FSIP1Q8NA03 581 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 OSMRQ99650 979 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 GDF15Q99988 308 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 POLD4Q9HCU8 107 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 KCND2Q9NZV8 630 aa23.67■■□□□ 1.38
CAPN1-220ENST00000530567 M0QZ92 97 aa23.66■■□□□ 1.38
CAPN1-220ENST00000530567 GHRP10912 638 aa23.66■■□□□ 1.38
CAPN1-220ENST00000530567 NDUFA8P51970 172 aa23.66■■□□□ 1.38
CAPN1-220ENST00000530567 DHX8Q14562 1220 aaKnown RBP23.66■■□□□ 1.38
CAPN1-220ENST00000530567 LPIN1Q14693 890 aa23.66■■□□□ 1.38
CAPN1-220ENST00000530567 TPRNQ4KMQ1 711 aa23.66■■□□□ 1.38
CAPN1-220ENST00000530567 FAM102BQ5T8I3 360 aa23.66■■□□□ 1.38
CAPN1-220ENST00000530567 C16orf59Q7L2K0 433 aa23.66■■□□□ 1.38
CAPN1-220ENST00000530567 ZNF710Q8N1W2 664 aa23.66■■□□□ 1.38
CAPN1-220ENST00000530567 BSNDQ8WZ55 320 aa23.66■■□□□ 1.38
CAPN1-220ENST00000530567 MRPS27Q92552 414 aaKnown RBP23.66■■□□□ 1.38
CAPN1-220ENST00000530567 GINS2Q9Y248 185 aa23.66■■□□□ 1.38
CAPN1-220ENST00000530567 NPHP3-ACAD11A0A0J9YXS1 232 aa23.65■■□□□ 1.38
CAPN1-220ENST00000530567 HIP1RO75146 1068 aa23.65■■□□□ 1.38
CAPN1-220ENST00000530567 CRYBB1P53674 252 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-220ENST00000530567 PPIGQ13427 754 aaKnown RBP eCLIP23.65■■□□□ 1.381e-6■■■■□ 20
CAPN1-220ENST00000530567 CAPSQ13938 189 aa23.65■■□□□ 1.38
CAPN1-220ENST00000530567 TCTN1Q2MV58 587 aa23.65■■□□□ 1.38
CAPN1-220ENST00000530567 DEFB128Q7Z7B8 93 aa23.65■■□□□ 1.38
CAPN1-220ENST00000530567 ZNF410Q86VK4 478 aa23.65■■□□□ 1.38
CAPN1-220ENST00000530567 IQUBQ8NA54 791 aa23.65■■□□□ 1.38
CAPN1-220ENST00000530567 NLRP4Q96MN2 994 aa23.65■■□□□ 1.38
CAPN1-220ENST00000530567 CUEDC2Q9H467 287 aa23.65■■□□□ 1.38
CAPN1-220ENST00000530567 AGO3Q9H9G7 860 aaKnown RBP23.65■■□□□ 1.38
CAPN1-220ENST00000530567 IL23AQ9NPF7 189 aa23.65■■□□□ 1.38
CAPN1-220ENST00000530567 A0A087WZ62 844 aa23.64■■□□□ 1.37
CAPN1-220ENST00000530567 MYMKA6NI61 221 aa23.64■■□□□ 1.37
CAPN1-220ENST00000530567 ACRP10323 421 aa23.64■■□□□ 1.37
CAPN1-220ENST00000530567 RAD51AP2Q09MP3 1159 aa23.64■■□□□ 1.37
CAPN1-220ENST00000530567 MXD4Q14582 209 aaPredicted RBP23.64■■□□□ 1.37
CAPN1-220ENST00000530567 CSPP1Q1MSJ5 1256 aa23.64■■□□□ 1.37
CAPN1-220ENST00000530567 REEP2Q9BRK0 252 aa23.64■■□□□ 1.37
CAPN1-220ENST00000530567 FDXACB1Q9BRP7 624 aaPredicted RBP23.64■■□□□ 1.37
CAPN1-220ENST00000530567 TIPINQ9BVW5 301 aa23.64■■□□□ 1.37
CAPN1-220ENST00000530567 IFT122Q9HBG6 1241 aa23.64■■□□□ 1.37
CAPN1-220ENST00000530567 KBTBD4Q9NVX7 518 aa23.64■■□□□ 1.37
CAPN1-220ENST00000530567 SQORQ9Y6N5 450 aa23.64■■□□□ 1.37
CAPN1-220ENST00000530567 ASAP2O43150 1006 aa23.63■■□□□ 1.37
CAPN1-220ENST00000530567 ACTN4O43707 911 aaKnown RBP23.63■■□□□ 1.37
CAPN1-220ENST00000530567 GADD45BO75293 160 aaPredicted RBP23.63■■□□□ 1.37
CAPN1-220ENST00000530567 DARSP14868 501 aaKnown RBP23.63■■□□□ 1.37
CAPN1-220ENST00000530567 CDC42EP1Q00587 391 aa23.63■■□□□ 1.37
CAPN1-220ENST00000530567 CACNB1Q02641 598 aaPredicted RBP23.63■■□□□ 1.37
CAPN1-220ENST00000530567 PLEKHG4Q58EX7 1191 aa23.63■■□□□ 1.37
CAPN1-220ENST00000530567 TSHZ1Q6ZSZ6 1077 aa23.63■■□□□ 1.37
CAPN1-220ENST00000530567 SV2BQ7L1I2 683 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms