RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 DNM2P50570 870 aa23.5■■□□□ 1.35
SMPD1-204ENST00000530395 TARBP2Q15633 366 aaKnown RBP23.5■■□□□ 1.35
SMPD1-204ENST00000530395 CLUL1Q15846 466 aa23.5■■□□□ 1.35
SMPD1-204ENST00000530395 LETM2Q2VYF4 491 aa23.5■■□□□ 1.35
SMPD1-204ENST00000530395 B3GNT9Q6UX72 402 aa23.5■■□□□ 1.35
SMPD1-204ENST00000530395 ABI1Q8IZP0 508 aa23.5■■□□□ 1.35
SMPD1-204ENST00000530395 LRFN3Q9BTN0 628 aa23.5■■□□□ 1.35
SMPD1-204ENST00000530395 PHF20Q9BVI0 1012 aa23.5■■□□□ 1.35
SMPD1-204ENST00000530395 NIFKQ9BYG3 293 aaKnown RBP23.5■■□□□ 1.35
SMPD1-204ENST00000530395 TMEM117Q9H0C3 514 aa23.5■■□□□ 1.35
SMPD1-204ENST00000530395 TYW1Q9NV66 732 aaKnown RBP23.5■■□□□ 1.35
SMPD1-204ENST00000530395 PFKFB2O60825 505 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 TBX10O75333 385 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 DARSP14868 501 aaKnown RBP23.49■■□□□ 1.35
SMPD1-204ENST00000530395 LAG3P18627 525 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 GTF2F1P35269 517 aaKnown RBP eCLIP23.49■■□□□ 1.35
SMPD1-204ENST00000530395 IRS1P35568 1242 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 ANAPC15P60006 121 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 DLX2Q07687 328 aaPredicted RBP23.49■■□□□ 1.35
SMPD1-204ENST00000530395 ADAM15Q13444 863 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 SMAD4Q13485 552 aaKnown RBP23.49■■□□□ 1.35
SMPD1-204ENST00000530395 ANKRD1Q15327 319 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 NEK8Q86SG6 692 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 THNSL1Q8IYQ7 743 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 COLGALT1Q8NBJ5 622 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 ZNF668Q96K58 619 aaPredicted RBP23.49■■□□□ 1.35
SMPD1-204ENST00000530395 RAPGEFL1Q9UHV5 662 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 CD207Q9UJ71 328 aa23.49■■□□□ 1.35
SMPD1-204ENST00000530395 LINC01565O15544 149 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 GPR37L1O60883 481 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 FGF18O76093 207 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 ALADP13716 330 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 GCFC2P16383 781 aaKnown RBP23.48■■□□□ 1.35
SMPD1-204ENST00000530395 ZP2Q05996 745 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 SMAD2Q15796 467 aaKnown RBP23.48■■□□□ 1.35
SMPD1-204ENST00000530395 ADGRD2Q7Z7M1 963 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 ADHFE1Q8IWW8 467 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 EFHBQ8N7U6 833 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 MICAL1Q8TDZ2 1067 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 POP1Q99575 1024 aaKnown RBP23.48■■□□□ 1.35
SMPD1-204ENST00000530395 NAP1L4Q99733 375 aaKnown RBP23.48■■□□□ 1.35
SMPD1-204ENST00000530395 GCOM2Q9BZD3 368 aaPredicted RBP23.48■■□□□ 1.35
SMPD1-204ENST00000530395 TLR9Q9NR96 1032 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 TPCN1Q9ULQ1 816 aa23.48■■□□□ 1.35
SMPD1-204ENST00000530395 FSD2A1L4K1 749 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 DDX11L8A8MPP1 907 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 MBTPS2O43462 519 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 SLC37A4O43826 429 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 DKC1O60832 514 aaKnown RBP eCLIP23.47■■□□□ 1.35
SMPD1-204ENST00000530395 NRIP1P48552 1158 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 PSMC5P62195 406 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 PPP4R3AQ6IN85 833 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 ECHDC2Q86YB7 292 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 LRRC43Q8N309 656 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 WASF1Q92558 559 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 FAM20AQ96MK3 541 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 JPH2Q9BR39 696 aaPredicted RBP23.47■■□□□ 1.35
SMPD1-204ENST00000530395 PPP4R2Q9NY27 417 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 DACT1Q9NYF0 836 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 HCN4Q9Y3Q4 1203 aa23.47■■□□□ 1.35
SMPD1-204ENST00000530395 PPP2R5CQ13362 524 aa23.46■■□□□ 1.35
SMPD1-204ENST00000530395 PDE12Q6L8Q7 609 aaKnown RBP23.46■■□□□ 1.35
SMPD1-204ENST00000530395 RBM23Q86U06 439 aaKnown RBP23.46■■□□□ 1.35
SMPD1-204ENST00000530395 RNF169Q8NCN4 708 aa23.46■■□□□ 1.35
SMPD1-204ENST00000530395 CWH43Q9H720 699 aa23.46■■□□□ 1.35
SMPD1-204ENST00000530395 TLE6Q9H808 572 aa23.46■■□□□ 1.35
SMPD1-204ENST00000530395 HCSTQ9UBK5 93 aa23.46■■□□□ 1.35
SMPD1-204ENST00000530395 IGKV6-21A0A0C4DH24 114 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 TMEM150BA6NC51 233 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 MARCH6O60337 910 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 CCNT1O60563 726 aaKnown RBP23.45■■□□□ 1.34
SMPD1-204ENST00000530395 STBD1O95210 358 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 SFPQP23246 707 aaKnown RBP eCLIP23.45■■□□□ 1.34
SMPD1-204ENST00000530395 PPM1AP35813 382 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 DRP2Q13474 957 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 PIK3AP1Q6ZUJ8 805 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 ZNF410Q86VK4 478 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 CASD1Q96PB1 797 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 INO80BQ9C086 356 aaPredicted RBP23.45■■□□□ 1.34
SMPD1-204ENST00000530395 KCNMB3Q9NPA1 279 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 SUCLA2Q9P2R7 463 aaPredicted RBP23.45■■□□□ 1.34
SMPD1-204ENST00000530395 ORC3Q9UBD5 711 aaPredicted RBP23.45■■□□□ 1.34
SMPD1-204ENST00000530395 PUF60Q9UHX1 559 aaKnown RBP23.45■■□□□ 1.34
SMPD1-204ENST00000530395 VAV3Q9UKW4 847 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 LZTS1Q9Y250 596 aa23.45■■□□□ 1.34
SMPD1-204ENST00000530395 A0A0U1RQF3 1178 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 FAM86C2PA6NEL3 165 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 C19orf67A6NJJ6 358 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 EIF5BO60841 1220 aaKnown RBP23.44■■□□□ 1.34
SMPD1-204ENST00000530395 MAFO75444 373 aaPredicted RBP23.44■■□□□ 1.34
SMPD1-204ENST00000530395 EOMESO95936 686 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 FGFR4P22455 802 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 QARSP47897 775 aaKnown RBP23.44■■□□□ 1.34
SMPD1-204ENST00000530395 AK2P54819 239 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 MSLNLQ96KJ4 702 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 ZNF558Q96NG5 402 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 CEP89Q96ST8 783 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 SH2D3AQ9BRG2 576 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 BRMS1Q9HCU9 246 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 C11orf16Q9NQ32 467 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 252.3 ms