RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CYB5D2Q8WUJ1 264 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 KRTAP4-11Q9BYQ6 195 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 RNF32Q9H0A6 362 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 DHX36Q9H2U1 1008 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 MCM9Q9NXL9 1143 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 BAZ2AQ9UIF9 1905 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 WDR33Q9C0J8 1336 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 FOXN1O15353 648 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 USP2O75604 605 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 YARSP54577 528 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 FKBP1BP68106 108 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 RRP1BQ14684 758 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 SLC4A8Q2Y0W8 1093 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 LDLRAD1Q5T700 205 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 C12orf60Q5U649 245 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 SAPCD2Q86UD0 394 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 TSPYL5Q86VY4 417 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 CAPNS2Q96L46 248 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 DSCC1Q9BVC3 393 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 GBA2Q9HCG7 927 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 ARPP21Q9UBL0 812 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 ZNF112Q9UJU3 913 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 AK5Q9Y6K8 562 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 LAMA4Q16363 1823 aa10.39□□□□□ -0.75
CCDC90B-217ENST00000530253 SEMA7AO75326 666 aa10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 HLA-DOAP06340 250 aa10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 INHBBP09529 407 aa10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 NF2P35240 595 aa10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 MFAP1P55081 439 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 PTH1RQ03431 593 aa10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 NR0B2Q15466 257 aa10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 RUFY2Q8WXA3 655 aa10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 ACSF2Q96CM8 615 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 LSG1Q9H089 658 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 PI4KBQ9UBF8 816 aa10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 HERC5Q9UII4 1024 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-217ENST00000530253 PEX10O60683 326 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 FGAP02671 866 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 ZGLP1P0C6A0 271 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 SHMT1P34896 483 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 TDO2P48775 406 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 CHRNEQ04844 493 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 PRKG1Q13976 671 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 DCAF15Q66K64 600 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 C16orf86Q6ZW13 317 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 MIGA2Q7L4E1 593 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 SPPL2CQ8IUH8 684 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 FOXP4Q8IVH2 680 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 DTWD2Q8NBA8 298 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 SLC44A5Q8NCS7 719 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 HOOK2Q96ED9 719 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 DYNLL2Q96FJ2 89 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 ZNF341Q9BYN7 854 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 NAPBQ9H115 298 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 KCNK12Q9HB15 430 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 SERPINB13Q9UIV8 391 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 ANAPC4Q9UJX5 808 aa10.37□□□□□ -0.75
CCDC90B-217ENST00000530253 THSD7BQ9C0I4 1608 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 UBE2Q2LH0YL09 131 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 APPP05067 770 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 HUNKP57058 714 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 DUSP4Q13115 394 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 SHROOM1Q2M3G4 852 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 NOL9Q5SY16 702 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 TATDN1Q6P1N9 297 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 C2orf69Q8N8R5 385 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 RNF141Q8WVD5 230 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 MAP4K1Q92918 833 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 CLMNQ96JQ2 1002 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 WRNIP1Q96S55 665 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 NACAP1Q9BZK3 213 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 GREB1LQ9C091 1923 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 DOCK1Q14185 1865 aa10.36□□□□□ -0.75
CCDC90B-217ENST00000530253 UNCXA6NJT0 531 aa10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 FGRP09769 529 aa10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 PPARAQ07869 468 aa10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 VGLL4Q14135 290 aa10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 SNX17Q15036 470 aa10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 ARMC9Q7Z3E5 817 aa10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 CCDC84Q86UT8 332 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 TBC1D10CQ8IV04 446 aa10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 FAM13CQ8NE31 585 aa10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 ZKSCAN4Q969J2 545 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 HHIPL1Q96JK4 782 aa10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 TAF6LQ9Y6J9 622 aa10.35□□□□□ -0.75
CCDC90B-217ENST00000530253 WASH4PA8MWX3 477 aa10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 MINDY4BA8MYZ0 360 aa10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 BPNT1O95861 308 aa10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 TFE3P19532 575 aaPredicted RBP10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 TRHRP34981 398 aaPredicted RBP10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 LBX1P52954 281 aa10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 CASC1Q6TDU7 716 aa10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 ANKRD13AQ8IZ07 590 aa10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 SCYL3Q8IZE3 742 aa10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 CRACR2BQ8N4Y2 399 aaPredicted RBP10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 NOC4LQ9BVI4 516 aaKnown RBP10.34□□□□□ -0.75
CCDC90B-217ENST00000530253 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms