RNA–Protein interactions for RNA: ENST00000530062.5

PDE4DIP-228, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2

Gene PDE4DIP, Length 1,076 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-228ENST00000530062 TFDP1Q14186 410 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 MXD4Q14582 209 aaPredicted RBP6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 NBR1Q14596 966 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 EMC2Q15006 297 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 KRT79Q5XKE5 535 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 SLC24A5Q71RS6 500 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 TMCO2Q7Z6W1 182 aaPredicted RBP6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 FAM228AQ86W67 206 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 CATSPER3Q86XQ3 398 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 NPAS4Q8IUM7 802 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 FIBCD1Q8N539 461 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 PIGOQ8TEQ8 1089 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 TMEM40Q8WWA1 233 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 PRPF31Q8WWY3 499 aaKnown RBP6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 ARNTL2Q8WYA1 636 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 NLRP4Q96MN2 994 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 TGS1Q96RS0 853 aaKnown RBP6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 ADAM2Q99965 735 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 OSBPL7Q9BZF2 842 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 ADAMTS10Q9H324 1103 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 PRDM12Q9H4Q4 367 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 DHX33Q9H6R0 707 aaKnown RBP6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 CDHR5Q9HBB8 845 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 ATP6V0A4Q9HBG4 840 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 ERVK-5Q9HDB9 667 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 CHST12Q9NRB3 414 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 RGS18Q9NS28 235 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 DACT1Q9NYF0 836 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 WRAP73Q9P2S5 460 aaPredicted RBP6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 DBR1Q9UK59 544 aaKnown RBP6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 RWDD3Q9Y3V2 267 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 PCDHB6Q9Y5E3 794 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 COL4A3BPQ9Y5P4 624 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 WDR81Q562E7 1941 aa6.3□□□□□ -1.4
PDE4DIP-228ENST00000530062 A0A087WZ62 844 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 LCHNA4D1U4 455 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 ARHGEF35A5YM69 484 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 HOXA2O43364 376 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 SRGAP2CP0DJJ0 459 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 SPATA31C1P0DKV0 1188 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 SKIP12755 728 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 DARSP14868 501 aaKnown RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 SYT1P21579 422 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 IBSPP21815 317 aaPredicted RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 IGFBP4P22692 258 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 PHKA2P46019 1235 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 RARRES1P49788 294 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 ERVK-21P61565 698 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 ATP2C1P98194 919 aaPredicted RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 DRP2Q13474 957 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 BTG3Q14201 252 aaPredicted RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 PCBP1Q15365 356 aaKnown RBP eCLIP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 ARL6IP4Q66PJ3 421 aaKnown RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 MICAL3Q7RTP6 2002 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 CATSPER4Q7RTX7 472 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 SRGAP1Q7Z6B7 1085 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 FERMT3Q86UX7 667 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 ABI1Q8IZP0 508 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 KCTD17Q8N5Z5 321 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 C4orf32Q8N8J7 132 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 IGSF22Q8N9C0 903 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 MCPH1Q8NEM0 835 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 SP7Q8TDD2 431 aaPredicted RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 SNX29Q8TEQ0 813 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 GBF1Q92538 1859 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 EVPLQ92817 2033 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 TMEM143Q96AN5 459 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 CDK5RAP3Q96JB5 506 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 ZNF668Q96K58 619 aaPredicted RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 AK8Q96MA6 479 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 CEP89Q96ST8 783 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 FDXACB1Q9BRP7 624 aaPredicted RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 TMX1Q9H3N1 280 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 ZSCAN16Q9H4T2 348 aaPredicted RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 ELAC1Q9H777 363 aaKnown RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 CERS4Q9HA82 394 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 BMP2KQ9NSY1 1161 aaPredicted RBP6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 MTUS1Q9ULD2 1270 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 DNM3Q9UQ16 869 aa6.29□□□□□ -1.4
PDE4DIP-228ENST00000530062 ADGRA3Q8IWK6 1321 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 SIP14410 1827 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 LINC01553A4QN01 128 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 VWA3AA6NCI4 1184 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 ZBTB39O15060 712 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 SLC26A4O43511 780 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 STX6O43752 255 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 USO1O60763 962 aaKnown RBP6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 MED24O75448 989 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 DGKIO75912 1065 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 ERLIN2O94905 339 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 EOMESO95936 686 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 RB1P06400 928 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 UBA7P41226 1012 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 RAB27AP51159 221 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 FAM189BP81408 668 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 POU5F1BQ06416 359 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 LAMTOR4Q0VGL1 99 aa6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 ZRSR1Q15695 479 aaKnown RBP6.28□□□□□ -1.4
PDE4DIP-228ENST00000530062 PTPROQ16827 1216 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms