RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 FGD2Q7Z6J4 655 aa4.84□□□□□ -1.63
CTR9-205ENST00000529898 CISD2Q8N5K1 135 aaKnown RBP4.84□□□□□ -1.63
CTR9-205ENST00000529898 FRAT1Q92837 279 aaPredicted RBP4.84□□□□□ -1.63
CTR9-205ENST00000529898 FOXRED1Q96CU9 486 aaPredicted RBP4.84□□□□□ -1.63
CTR9-205ENST00000529898 FAM210AQ96ND0 272 aa4.84□□□□□ -1.63
CTR9-205ENST00000529898 GBP4Q96PP9 640 aa4.84□□□□□ -1.63
CTR9-205ENST00000529898 ZNF747Q9BV97 191 aa4.84□□□□□ -1.63
CTR9-205ENST00000529898 Q9UFV3 132 aa4.84□□□□□ -1.63
CTR9-205ENST00000529898 CCER2I3L3R5 266 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 SCDO00767 359 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 ARHGAP6O43182 974 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 HMGCRP04035 888 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 TACR2P21452 398 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 CD83Q01151 205 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 HGFACQ04756 655 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 ZNF568Q3ZCX4 644 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 HS1BP3Q53T59 392 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 AGBL4Q5VU57 503 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 CC2D1AQ6P1N0 951 aaPredicted RBP4.83□□□□□ -1.64
CTR9-205ENST00000529898 MAMDC4Q6UXC1 1216 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 USP30Q70CQ3 517 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 RTN4RL1Q86UN2 441 aaPredicted RBP4.83□□□□□ -1.64
CTR9-205ENST00000529898 CREBRFQ8IUR6 639 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 FUKQ8N0W3 1084 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 BCL6BQ8N143 479 aaPredicted RBP4.83□□□□□ -1.64
CTR9-205ENST00000529898 MNS1Q8NEH6 495 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 LRRC37BQ96QE4 947 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 TSPAN18Q96SJ8 248 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 CCDC94Q9BW85 323 aaPredicted RBP4.83□□□□□ -1.64
CTR9-205ENST00000529898 OSBPL2Q9H1P3 480 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 UCKL1Q9NWZ5 548 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 CEP83Q9Y592 693 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 CFAP43Q8NDM7 1665 aa4.83□□□□□ -1.64
CTR9-205ENST00000529898 DHX57Q6P158 1386 aaKnown RBP4.82□□□□□ -1.64
CTR9-205ENST00000529898 B4E1Z4 1266 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 DYNC1I1O14576 645 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 COMTP21964 271 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 FNTBP49356 437 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 MTA1Q13330 715 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 MOGSQ13724 837 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 PCOLCEQ15113 449 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 CCDC96Q2M329 555 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 SPDYAQ5MJ70 313 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 IGSF22Q8N9C0 903 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 GIMAP8Q8ND71 665 aaPredicted RBP4.82□□□□□ -1.64
CTR9-205ENST00000529898 CLUHP3Q96NS8 147 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 FOXB1Q99853 325 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 PAIP2Q9BPZ3 127 aaKnown RBP4.82□□□□□ -1.64
CTR9-205ENST00000529898 BOCQ9BWV1 1114 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 OR10A2Q9H208 303 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 NR2E1Q9Y466 385 aa4.82□□□□□ -1.64
CTR9-205ENST00000529898 NINLQ9Y2I6 1382 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 RAD50Q92878 1312 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 PRAMEF22A3QJZ6 481 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 VGLL3A8MV65 326 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 PLSCR1O15162 318 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 ANP32CO43423 234 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 C6P13671 934 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 RPS19P39019 145 aaKnown RBP4.81□□□□□ -1.64
CTR9-205ENST00000529898 KCNQ1P51787 676 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 IRF9Q00978 393 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 ALDH6A1Q02252 535 aaKnown RBP4.81□□□□□ -1.64
CTR9-205ENST00000529898 MYBPC2Q14324 1141 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 NOLC1Q14978 699 aaKnown RBP eCLIP4.81□□□□□ -1.64
CTR9-205ENST00000529898 PRKD1Q15139 912 aaPredicted RBP4.81□□□□□ -1.64
CTR9-205ENST00000529898 NFE2L2Q16236 605 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 SPTY2D1Q68D10 685 aaPredicted RBP4.81□□□□□ -1.64
CTR9-205ENST00000529898 GRAMD4Q6IC98 578 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 ZCCHC8Q6NZY4 707 aaKnown RBP4.81□□□□□ -1.64
CTR9-205ENST00000529898 POLNQ7Z5Q5 900 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 ANKRD23Q86SG2 305 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 SDR16C5Q8N3Y7 309 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 C2orf69Q8N8R5 385 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 SLC16A11Q8NCK7 471 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 CALML6Q8TD86 181 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 SNRNP27Q8WVK2 155 aaKnown RBP4.81□□□□□ -1.64
CTR9-205ENST00000529898 SREK1Q8WXA9 508 aaKnown RBP4.81□□□□□ -1.64
CTR9-205ENST00000529898 MYCBPQ99417 103 aaPredicted RBP4.81□□□□□ -1.64
CTR9-205ENST00000529898 NELFAQ9H3P2 528 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 ZHX1Q9UKY1 873 aaPredicted RBP4.81□□□□□ -1.64
CTR9-205ENST00000529898 VWA7Q9Y334 891 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 MAPKBP1O60336 1514 aa4.81□□□□□ -1.64
CTR9-205ENST00000529898 RRBP1Q9P2E9 1410 aaKnown RBP4.8□□□□□ -1.64
CTR9-205ENST00000529898 CYR61O00622 381 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 DVL2O14641 736 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 ZNF500O60304 480 aaPredicted RBP4.8□□□□□ -1.64
CTR9-205ENST00000529898 RFPL3O75679 317 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 ASLP04424 464 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 CCDC172P0C7W6 258 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 APEX1P27695 318 aaKnown RBP4.8□□□□□ -1.64
CTR9-205ENST00000529898 ADCY8P40145 1251 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 MRE11P49959 708 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 RRADP55042 308 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 SQSTM1Q13501 440 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 MIIPQ5JXC2 388 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 PALM2Q8IXS6 379 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 MSL3Q8N5Y2 521 aaKnown RBP4.8□□□□□ -1.64
CTR9-205ENST00000529898 PMFBP1Q8TBY8 1022 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 ITFG2Q969R8 447 aa4.8□□□□□ -1.64
CTR9-205ENST00000529898 SORCS2Q96PQ0 1159 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms