RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 JPH1Q9HDC5 661 aaPredicted RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 DBR1Q9UK59 544 aaKnown RBP4.04□□□□□ -1.76
PTPRC-213ENST00000529828 PCDHA2Q9Y5H9 948 aa4.04□□□□□ -1.76
PTPRC-213ENST00000529828 KAT6AQ92794 2004 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.03□□□□□ -1.76
PTPRC-213ENST00000529828 RRN3P2A6NIE6 340 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 PPP1R3GB7ZBB8 358 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 C9IYK1 514 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 STK25O00506 426 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 NARSO43776 548 aaKnown RBP4.03□□□□□ -1.76
PTPRC-213ENST00000529828 CLASP2O75122 1294 aaKnown RBP4.03□□□□□ -1.76
PTPRC-213ENST00000529828 VTNP04004 478 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 MYBP10242 640 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 LAG3P18627 525 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 KLRC1P26715 233 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 METAP2P50579 478 aaKnown RBP eCLIP4.03□□□□□ -1.76
PTPRC-213ENST00000529828 ACTR2P61160 394 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 TROAPQ12815 778 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 WTAPQ15007 396 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 ANGPT1Q15389 498 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 LONRF3Q496Y0 759 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 CES5AQ6NT32 575 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 KCNT2Q6UVM3 1135 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 SLC24A5Q71RS6 500 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 DGLUCYQ7Z3D6 616 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 SIX5Q8N196 739 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 CCDC82Q8N4S0 544 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 SAMD3Q8N6K7 520 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 ST13P5Q8NFI4 369 aaPredicted RBP4.03□□□□□ -1.76
PTPRC-213ENST00000529828 CYP2W1Q8TAV3 490 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 CASP10Q92851 521 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 ZNF558Q96NG5 402 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 CASD1Q96PB1 797 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 DSCC1Q9BVC3 393 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 PRKD2Q9BZL6 878 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 ADAM7Q9H2U9 754 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 RGS18Q9NS28 235 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 RNF19AQ9NV58 838 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 SLC9A2Q9UBY0 812 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 PUF60Q9UHX1 559 aaKnown RBP4.03□□□□□ -1.76
PTPRC-213ENST00000529828 FBXL21Q9UKT6 434 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 OTOGLQ3ZCN5 2332 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 WDFY3Q8IZQ1 3526 aa4.03□□□□□ -1.76
PTPRC-213ENST00000529828 SMIM35A0A1B0GVV1 85 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 ERICH2A1L162 156 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 C2orf71A6NGG8 1288 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 BACH1O14867 736 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 NPR3P17342 541 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 HOXB8P17481 243 aaPredicted RBP4.03□□□□□ -1.77
PTPRC-213ENST00000529828 FGFR4P22455 802 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 STAT5BP51692 787 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 PLCB3Q01970 1234 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 TRDNQ13061 729 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 TRAF1Q13077 416 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 ITGB3BPQ13352 177 aaPredicted RBP4.03□□□□□ -1.77
PTPRC-213ENST00000529828 SMC1AQ14683 1233 aaKnown RBP4.03□□□□□ -1.77
PTPRC-213ENST00000529828 SPECC1Q5M775 1068 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 XRRA1Q6P2D8 792 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 TMEM184AQ6ZMB5 413 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 CATIPQ7Z7H3 387 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 TMEM173Q86WV6 379 aaPredicted RBP4.03□□□□□ -1.77
PTPRC-213ENST00000529828 CCDC105Q8IYK2 499 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 KIAA0319LQ8IZA0 1049 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 ABI1Q8IZP0 508 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 LRRC43Q8N309 656 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 DCLK2Q8N568 766 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 HELQQ8TDG4 1101 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 RRP36Q96EU6 259 aaKnown RBP4.03□□□□□ -1.77
PTPRC-213ENST00000529828 CDHR1Q96JP9 859 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 CNTNAP3BQ96NU0 1288 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 CNTNAP3Q9BZ76 1288 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 PSTPIP2Q9H939 334 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 NGRNQ9NPE2 291 aaKnown RBP4.03□□□□□ -1.77
PTPRC-213ENST00000529828 JADE2Q9NQC1 790 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 TMEM161AQ9NX61 479 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 SEC63Q9UGP8 760 aaKnown RBP4.03□□□□□ -1.77
PTPRC-213ENST00000529828 PCDHA6Q9UN73 950 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 PCDHA8Q9Y5H6 950 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 UBIAD1Q9Y5Z9 338 aa4.03□□□□□ -1.77
PTPRC-213ENST00000529828 FNDC1Q4ZHG4 1894 aaPredicted RBP4.02□□□□□ -1.77
PTPRC-213ENST00000529828 MYO10Q9HD67 2058 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 MAP1BP46821 2468 aaKnown RBP4.02□□□□□ -1.77
PTPRC-213ENST00000529828 KDM3AQ9Y4C1 1321 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 LOXHD1Q8IVV2 1947 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 FSD2A1L4K1 749 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 SPDYE3A6NKU9 549 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 PIK3CDO00329 1044 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 CXCL14O95715 111 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 EOMESO95936 686 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 CCNE2O96020 404 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 CFHP08603 1231 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 CYP21A2P08686 494 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 AOC1P19801 751 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 RFX1P22670 979 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 MTHFRP42898 656 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 CLCN3P51790 818 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 ANTXR2P58335 489 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 PTH1RQ03431 593 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 KRT17Q04695 432 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 COL9A3Q14050 684 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms