RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 LPXNO60711 386 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 DGKIO75912 1065 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 SLITRK3O94933 977 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 EIF4BP23588 611 aaKnown RBP17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 NLRP11P59045 1033 aaKnown RBP17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 DSC3Q14574 896 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 NCAPH2Q6IBW4 605 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 ARNTL2Q8WYA1 636 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 DYDC2Q96IM9 177 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 TMEM60Q9H2L4 133 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 RGS18Q9NS28 235 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 C1orf112Q9NSG2 853 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 ST3GAL5Q9UNP4 418 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 MTCH2Q9Y6C9 303 aa17.31■□□□□ 0.36
CCDC90B-215ENST00000529745 ADGRA3Q8IWK6 1321 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 TMEM150BA6NC51 233 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 UPP2O95045 317 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 LINC00271P0C7V0 271 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 STAG3L1P0CL83 205 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 YWHABP31946 246 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 RFC5P40937 340 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 SARSP49591 514 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 DNM2P50570 870 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 GRB10Q13322 594 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 TMEM266Q2M3C6 531 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 OTUD6AQ7L8S5 288 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 ALYREFQ86V81 257 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 ZNF410Q86VK4 478 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 CLP1Q92989 425 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 EIF2AK1Q9BQI3 630 aaKnown RBP17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 CERS4Q9HA82 394 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 SUGCTQ9HAC7 445 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 RGL1Q9NZL6 768 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 GINS2Q9Y248 185 aa17.3■□□□□ 0.36
CCDC90B-215ENST00000529745 PRRC2BQ5JSZ5 2229 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 C9IYK1 514 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 C5orf67F2Z3F1 127 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 RFXAPO00287 272 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 GTPBP6O43824 516 aaPredicted RBP17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 MGEA5O60502 916 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 DARSP14868 501 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 IGFBP4P22692 258 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 MCM7P33993 719 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 TXKP42681 527 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 FAM189BP81408 668 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 NFX1Q12986 1120 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 DRP2Q13474 957 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 TTC38Q5R3I4 469 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 PLA2G4FQ68DD2 849 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 ELAC1Q9H777 363 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 ANKEF1Q9NU02 776 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 RWDD3Q9Y3V2 267 aa17.29■□□□□ 0.36
CCDC90B-215ENST00000529745 OR52Z1P0C646 297 aa17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 XRCC6P12956 609 aaKnown RBP eCLIP17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 BMP1P13497 986 aa17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 NPEPPSP55786 919 aa17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 CCDC85BQ15834 202 aaPredicted RBP17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 SLC24A5Q71RS6 500 aa17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 CMTR2Q8IYT2 770 aaKnown RBP17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 FIBCD1Q8N539 461 aa17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 C4orf32Q8N8J7 132 aa17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 SLC7A3Q8WY07 619 aa17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 CEP170P1Q96L14 293 aa17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 ADAM2Q99965 735 aa17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 C17orf80Q9BSJ5 609 aa17.28■□□□□ 0.36
CCDC90B-215ENST00000529745 H3BNC9 293 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 RB1P06400 928 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 MUTP22033 750 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 GJB2P29033 226 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 CYP4A11Q02928 519 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 CUL4AQ13619 759 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 CTTNQ14247 550 aaKnown RBP17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 EPC2Q52LR7 807 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 TMEM192Q8IY95 271 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 ZNF579Q8NAF0 562 aaKnown RBP17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 FBXO22Q8NEZ5 403 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 PPP1R16BQ96T49 567 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 SH2D3AQ9BRG2 576 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 TRAIPQ9BWF2 469 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 INO80BQ9C086 356 aaPredicted RBP17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 EPHX3Q9H6B9 360 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 TUFT1Q9NNX1 390 aa17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 SUCLA2Q9P2R7 463 aaPredicted RBP17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.27■□□□□ 0.36
CCDC90B-215ENST00000529745 DENND3A2RUS2 1198 aa17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 POTEMA6NI47 508 aa17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 SPATA31C1P0DKV0 1188 aa17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 TOB1P50616 345 aaPredicted RBP17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 TPH2Q8IWU9 490 aa17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 GDPD5Q8WTR4 605 aa17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 TCP11Q8WWU5 503 aa17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 POLR3CQ9BUI4 534 aaPredicted RBP17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 GCOM2Q9BZD3 368 aaPredicted RBP17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 CHST12Q9NRB3 414 aa17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 TMEM161AQ9NX61 479 aa17.26■□□□□ 0.35
CCDC90B-215ENST00000529745 PLXNA4Q9HCM2 1894 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms