RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 ATP6V0A4Q9HBG4 840 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 EYSQ5T1H1 3165 aa15.58■□□□□ 0.08
USF1-209ENST00000529476 A0A1B0GVL5 298 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 A0A1W2PQ27 194 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 A0A1W2PQ64 194 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 A0A1W2PQD8 194 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 SELPP16109 830 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 PFKFB1P16118 471 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 CYP11B2P19099 503 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 SLC12A3P55017 1021 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 MRPS6P82932 125 aaKnown RBP15.57■□□□□ 0.08
USF1-209ENST00000529476 RINT1Q6NUQ1 792 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 LRRC8DQ7L1W4 858 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 MAEAQ7L5Y9 396 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 EXOC8Q8IYI6 725 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 SYT2Q8N9I0 419 aaPredicted RBP15.57■□□□□ 0.08
USF1-209ENST00000529476 LARP4BQ92615 738 aaKnown RBP15.57■□□□□ 0.08
USF1-209ENST00000529476 DHX58Q96C10 678 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 SCLYQ96I15 445 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 MAP7D2Q96T17 732 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 SUCLA2Q9P2R7 463 aaPredicted RBP15.57■□□□□ 0.08
USF1-209ENST00000529476 STK17AQ9UEE5 414 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 AKT3Q9Y243 479 aa15.57■□□□□ 0.08
USF1-209ENST00000529476 RSPH10B2B2RC85 870 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 POLR2DO15514 142 aaKnown RBP15.56■□□□□ 0.08
USF1-209ENST00000529476 CAND2O75155 1236 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 CHRNA1P02708 482 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 IQCF3P0C7M6 154 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 RSPH10BP0C881 870 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 COL9A1P20849 921 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 DNM2P50570 870 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 MGAT3Q09327 533 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 E2F4Q16254 413 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 CSPP1Q1MSJ5 1256 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 FAM26DQ5JW98 314 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 CLEC17AQ6ZS10 378 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 C1orf186Q6ZWK4 172 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 NME8Q8N427 588 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 FSIP1Q8NA03 581 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 MRPS27Q92552 414 aaKnown RBP15.56■□□□□ 0.08
USF1-209ENST00000529476 BADQ92934 168 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 ZNF668Q96K58 619 aaPredicted RBP15.56■□□□□ 0.08
USF1-209ENST00000529476 GOLPH3LQ9H4A5 285 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 POLD4Q9HCU8 107 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 GPRC5CQ9NQ84 441 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 KCNH3Q9ULD8 1083 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 HPSEQ9Y251 543 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 CDY2AQ9Y6F7 541 aa15.56■□□□□ 0.08
USF1-209ENST00000529476 NPHP3-ACAD11A0A0J9YXS1 232 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 FAM237AA0A1B0GTK4 181 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 GOLGA6L4A6NEF3 574 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 GAS2O43903 313 aaKnown RBP15.55■□□□□ 0.08
USF1-209ENST00000529476 GADD45BO75293 160 aaPredicted RBP15.55■□□□□ 0.08
USF1-209ENST00000529476 RPLP2P05387 115 aaKnown RBP15.55■□□□□ 0.08
USF1-209ENST00000529476 NDUFA8P51970 172 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 MBTPS1Q14703 1052 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 KIZQ2M2Z5 673 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 FAM102BQ5T8I3 360 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 IER5Q5VY09 327 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 MFSD5Q6N075 450 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 GPBP1Q86WP2 473 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 RHPN2Q8IUC4 686 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 KSR1Q8IVT5 923 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 IQUBQ8NA54 791 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 TMEM87AQ8NBN3 555 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 MCPH1Q8NEM0 835 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 TCP11Q8WWU5 503 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 PRPF31Q8WWY3 499 aaKnown RBP15.55■□□□□ 0.08
USF1-209ENST00000529476 PSPC1Q8WXF1 523 aaKnown RBP15.55■□□□□ 0.08
USF1-209ENST00000529476 CDX2Q99626 313 aaPredicted RBP15.55■□□□□ 0.08
USF1-209ENST00000529476 CELF4Q9BZC1 486 aaKnown RBP15.55■□□□□ 0.08
USF1-209ENST00000529476 OSBPL7Q9BZF2 842 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 POLR3FQ9H1D9 316 aaPredicted RBP15.55■□□□□ 0.08
USF1-209ENST00000529476 CDHR5Q9HBB8 845 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 GINS2Q9Y248 185 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 TRPV2Q9Y5S1 764 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 MYH11P35749 1972 aa15.55■□□□□ 0.08
USF1-209ENST00000529476 M0QZ92 97 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 GPR32O75388 356 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 CSF2RAP15509 400 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 ARL2P36404 184 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 GPC3P51654 580 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 NLRP11P59045 1033 aaKnown RBP15.54■□□□□ 0.08
USF1-209ENST00000529476 RAD51AP2Q09MP3 1159 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 GPNMBQ14956 572 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 ARSHQ5FYA8 562 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 TMEM199Q8N511 208 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 MAFAQ8NHW3 353 aaPredicted RBP15.54■□□□□ 0.08
USF1-209ENST00000529476 ASAP3Q8TDY4 903 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 ADAMTS10Q9H324 1103 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 RAPGEFL1Q9UHV5 662 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 COL4A3BPQ9Y5P4 624 aa15.54■□□□□ 0.08
USF1-209ENST00000529476 NBNO60934 754 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 HIP1RO75146 1068 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 GLRA2P23416 452 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 GUCY2CP25092 1073 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 SYKP43405 635 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
USF1-209ENST00000529476 LAMTOR4Q0VGL1 99 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 MAPK7Q13164 816 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms