RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 HVCN1Q96D96 273 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 MAP7D2Q96T17 732 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 MTRQ99707 1265 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 TRIM9Q9C026 710 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 C2orf40Q9H1Z8 148 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 BHMT2Q9H2M3 363 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 RNPEPQ9H4A4 650 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 BCAS3Q9H6U6 928 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 GDPD2Q9HCC8 539 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 DACT1Q9NYF0 836 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 CGNQ9P2M7 1197 aaKnown RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 SEPT9Q9UHD8 586 aaPredicted RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 COL4A3BPQ9Y5P4 624 aa6.9□□□□□ -1.3
MACF1-228ENST00000528611 DDX49Q9Y6V7 483 aaKnown RBP6.9□□□□□ -1.3
MACF1-228ENST00000528611 KAT6AQ92794 2004 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 PP2D1A8MPX8 630 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 ZBTB42B2RXF5 422 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 E9PMD0 336 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 NR1I2O75469 434 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 ECM2O94769 699 aaPredicted RBP6.89□□□□□ -1.31
MACF1-228ENST00000528611 RHOBTB3O94955 611 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 C22orf31O95567 290 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 SMIM10L2AP0DMW4 78 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 SMIM10L2BP0DMW5 78 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 KLRC1P26715 233 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 ARL2P36404 184 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 NAMPTP43490 491 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 SARSP49591 514 aaKnown RBP6.89□□□□□ -1.31
MACF1-228ENST00000528611 POLGP54098 1239 aaPredicted RBP6.89□□□□□ -1.31
MACF1-228ENST00000528611 BEX3Q00994 111 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 POU5F1Q01860 360 aaKnown RBP6.89□□□□□ -1.31
MACF1-228ENST00000528611 SP4Q02446 784 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 BFSP2Q13515 415 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 POSTNQ15063 836 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 NFKBIBQ15653 356 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 ECM1Q16610 540 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 UGCGQ16739 394 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 NBPF20Q3BBV1 942 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 LONRF3Q496Y0 759 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 FAM26DQ5JW98 314 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 SPECC1Q5M775 1068 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 TMEM63BQ5T3F8 832 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 GJC2Q5T442 439 aaPredicted RBP6.89□□□□□ -1.31
MACF1-228ENST00000528611 GPR153Q6NV75 609 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 MTHFD1LQ6UB35 978 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 CXCL17Q6UXB2 119 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 SLC39A5Q6ZMH5 540 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 UNC13DQ70J99 1090 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 UBE2Q1Q7Z7E8 422 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 SERINC5Q86VE9 423 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 LINC01465Q8N7H1 131 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 PDILTQ8N807 584 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 PSPC1Q8WXF1 523 aaKnown RBP6.89□□□□□ -1.31
MACF1-228ENST00000528611 DDX12PQ92771 950 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 GJA10Q969M2 543 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 DHX58Q96C10 678 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 PAGE5Q96GU1 130 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 IFT74Q96LB3 600 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 PRIMPOLQ96LW4 560 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 NUP62CLQ9H1M0 184 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 C11orf49Q9H6J7 331 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 TMEM134Q9H6X4 195 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 PARVGQ9HBI0 331 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 WRAP73Q9P2S5 460 aaPredicted RBP6.89□□□□□ -1.31
MACF1-228ENST00000528611 TUBE1Q9UJT0 475 aa6.89□□□□□ -1.31
MACF1-228ENST00000528611 DOCK5Q9H7D0 1870 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 UBE4BO95155 1302 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 A0A087X0B3 334 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 MYADML2A6NDP7 307 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 DCDC2CA8MYV0 355 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 M0QZ92 97 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 KIAA0391O15091 583 aaKnown RBP6.88□□□□□ -1.31
MACF1-228ENST00000528611 EIF3DO15371 548 aaKnown RBP eCLIP6.88□□□□□ -1.31
MACF1-228ENST00000528611 GADD45BO75293 160 aaPredicted RBP6.88□□□□□ -1.31
MACF1-228ENST00000528611 TBCAO75347 108 aaKnown RBP6.88□□□□□ -1.31
MACF1-228ENST00000528611 CD4P01730 458 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 PLS3P13797 630 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 RFC2P35250 354 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 PSMC6P62333 389 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 EHHADHQ08426 723 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 NCBP1Q09161 790 aaKnown RBP6.88□□□□□ -1.31
MACF1-228ENST00000528611 DPYDQ12882 1025 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 DMP1Q13316 513 aaPredicted RBP6.88□□□□□ -1.31
MACF1-228ENST00000528611 GIT2Q14161 759 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 MYBPC2Q14324 1141 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 EMC2Q15006 297 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 ZRSR1Q15695 479 aaKnown RBP6.88□□□□□ -1.31
MACF1-228ENST00000528611 MTERF2Q49AM1 385 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 MARCH8Q5T0T0 291 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 CCDC183Q5T5S1 534 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 EFCAB12Q6NXP0 572 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 KCNK18Q7Z418 384 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 SRGAP1Q7Z6B7 1085 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 GPBP1Q86WP2 473 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 PIGOQ8TEQ8 1089 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 LMBR1Q8WVP7 490 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 VTI1AQ96AJ9 217 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 DNAJC19Q96DA6 116 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 HTATIP2Q9BUP3 242 aa6.88□□□□□ -1.31
MACF1-228ENST00000528611 GOLPH3LQ9H4A5 285 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms