RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 MFRPQ9BY79 579 aa10.17□□□□□ -0.78
CMTM1-210ENST00000528441 GCOM2Q9BZD3 368 aaPredicted RBP10.17□□□□□ -0.78
CMTM1-210ENST00000528441 PRDM6Q9NQX0 595 aa10.17□□□□□ -0.78
CMTM1-210ENST00000528441 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.17□□□□□ -0.78
CMTM1-210ENST00000528441 PCDHA12Q9UN75 941 aa10.17□□□□□ -0.78
CMTM1-210ENST00000528441 ST3GAL5Q9UNP4 418 aa10.17□□□□□ -0.78
CMTM1-210ENST00000528441 NOC2LQ9Y3T9 749 aaKnown RBP10.17□□□□□ -0.78
CMTM1-210ENST00000528441 RWDD3Q9Y3V2 267 aa10.17□□□□□ -0.78
CMTM1-210ENST00000528441 SQORQ9Y6N5 450 aa10.17□□□□□ -0.78
CMTM1-210ENST00000528441 EPOPA6NHQ4 379 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 TBKBP1A7MCY6 615 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 TBX3O15119 743 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 ZNF862O60290 1169 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 SFPQP23246 707 aaKnown RBP eCLIP10.16□□□□□ -0.78
CMTM1-210ENST00000528441 ERVK-21P61565 698 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 PPP2R5CQ13362 524 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 EPHA7Q15375 998 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 EPC2Q52LR7 807 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 EARS2Q5JPH6 523 aaKnown RBP10.16□□□□□ -0.78
CMTM1-210ENST00000528441 SPRED2Q7Z698 418 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 TMEM192Q8IY95 271 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 EXOC8Q8IYI6 725 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 ERMNQ8TAM6 284 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 SYMPKQ92797 1274 aaKnown RBP10.16□□□□□ -0.78
CMTM1-210ENST00000528441 ZSWIM4Q9H7M6 989 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 TTC12Q9H892 705 aaPredicted RBP10.16□□□□□ -0.78
CMTM1-210ENST00000528441 ATP6V0A4Q9HBG4 840 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 C1orf112Q9NSG2 853 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 SUCLA2Q9P2R7 463 aaPredicted RBP10.16□□□□□ -0.78
CMTM1-210ENST00000528441 NLRC5Q86WI3 1866 aa10.16□□□□□ -0.78
CMTM1-210ENST00000528441 KDM3AQ9Y4C1 1321 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 POTEMA6NI47 508 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 EML1O00423 815 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 FGFR4P22455 802 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 YWHABP31946 246 aaKnown RBP10.15□□□□□ -0.78
CMTM1-210ENST00000528441 SARSP49591 514 aaKnown RBP10.15□□□□□ -0.78
CMTM1-210ENST00000528441 RBM25P49756 843 aaKnown RBP10.15□□□□□ -0.78
CMTM1-210ENST00000528441 HTRA4P83105 476 aaPredicted RBP10.15□□□□□ -0.78
CMTM1-210ENST00000528441 ZNF174Q15697 407 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 TMEM132AQ24JP5 1023 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 AAK1Q2M2I8 961 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 TTC38Q5R3I4 469 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 TWF2Q6IBS0 349 aaKnown RBP10.15□□□□□ -0.78
CMTM1-210ENST00000528441 CATSPER4Q7RTX7 472 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 FAM228AQ86W67 206 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 ZNF710Q8N1W2 664 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 MBOAT7Q96N66 472 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 MTRQ99707 1265 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 INO80BQ9C086 356 aaPredicted RBP10.15□□□□□ -0.78
CMTM1-210ENST00000528441 CDHR5Q9HBB8 845 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 ERVK-5Q9HDB9 667 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 KCNMB3Q9NPA1 279 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 CYP26B1Q9NR63 512 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 AAASQ9NRG9 546 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 RGL1Q9NZL6 768 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 SMC3Q9UQE7 1217 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 MTCH2Q9Y6C9 303 aa10.15□□□□□ -0.78
CMTM1-210ENST00000528441 A0A087WZ62 844 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 ZBTB42B2RXF5 422 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 EDIL3O43854 480 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 OR52Z1P0C646 297 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 SRGAP2CP0DJJ0 459 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 TECP42680 631 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 MCM2P49736 904 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 GPC3P51654 580 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 NPEPPSP55786 919 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 MRPS5P82675 430 aaKnown RBP10.14□□□□□ -0.79
CMTM1-210ENST00000528441 CDC42EP1Q00587 391 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 ST3GAL1Q11201 340 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 TIGD5Q53EQ6 642 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 TJAP1Q5JTD0 557 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 SLC24A5Q71RS6 500 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 NEK9Q8TD19 979 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 MICAL1Q8TDZ2 1067 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 TMEM40Q8WWA1 233 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 TCP11Q8WWU5 503 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 PSPC1Q8WXF1 523 aaKnown RBP10.14□□□□□ -0.79
CMTM1-210ENST00000528441 LINC01599Q8WXQ3 324 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 PPP2R3CQ969Q6 453 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 TMEM143Q96AN5 459 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 EIF2AK1Q9BQI3 630 aaKnown RBP10.14□□□□□ -0.79
CMTM1-210ENST00000528441 FDXACB1Q9BRP7 624 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-210ENST00000528441 C11orf84Q9BUA3 381 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-210ENST00000528441 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-210ENST00000528441 DACT1Q9NYF0 836 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 VAV3Q9UKW4 847 aa10.14□□□□□ -0.79
CMTM1-210ENST00000528441 PIN4Q9Y237 131 aaKnown RBP10.14□□□□□ -0.79
CMTM1-210ENST00000528441 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-210ENST00000528441 RALGAPA2Q2PPJ7 1873 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 HOXA2O43364 376 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 USO1O60763 962 aaKnown RBP10.13□□□□□ -0.79
CMTM1-210ENST00000528441 GPR32O75388 356 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 CSDE1O75534 798 aaKnown RBP10.13□□□□□ -0.79
CMTM1-210ENST00000528441 ERLIN2O94905 339 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 EIF4BP23588 611 aaKnown RBP10.13□□□□□ -0.79
CMTM1-210ENST00000528441 RFC5P40937 340 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 GATMP50440 423 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 NCBP1Q09161 790 aaKnown RBP10.13□□□□□ -0.79
CMTM1-210ENST00000528441 TFDP1Q14186 410 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 EMC2Q15006 297 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms