RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 EMBQ6PCB8 327 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 CTAGE3PQ8IX95 158 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 ZNF513Q8N8E2 541 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-218ENST00000528232 ZNF483Q8TF39 744 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-218ENST00000528232 CCSER1Q9C0I3 900 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 ABCB6Q9NP58 842 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 DIABLOQ9NR28 239 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 ETAA1Q9NY74 926 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 SALL3Q9BXA9 1300 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 USP17L15C9J2P7 530 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 USP17L13C9JLJ4 530 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 USP17L11C9JVI0 530 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 USP17L18D6R9N7 530 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 USP17L22D6RA61 530 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 USP17L17D6RBQ6 530 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 USP17L19D6RCP7 530 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 USP17L20D6RJB6 530 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 FOXN1O15353 648 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 EIF2AK2P19525 551 aaKnown RBP7.74□□□□□ -1.17
CTNND1-218ENST00000528232 KCNA4P22459 653 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 IGBP1P78318 339 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 USP17L24Q0WX57 530 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 MTMR1Q13613 665 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 CASP8Q14790 479 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 USP17L6PQ6QN14 398 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 TRIM42Q8IWZ5 723 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 ATP6V0A4Q9HBG4 840 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 TUBE1Q9UJT0 475 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 ITIH6Q6UXX5 1313 aa7.74□□□□□ -1.17
CTNND1-218ENST00000528232 A0A1B0GW55 424 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 A6NJR5 290 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 HGSO14964 777 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 HNRNPCL1O60812 293 aaKnown RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DUX4L2P0CJ85 424 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DUX4L3P0CJ86 424 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DUX4L4P0CJ87 422 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DUX4L5P0CJ88 424 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DUX4L6P0CJ89 424 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DUX4L7P0CJ90 424 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 CACNB3P54284 484 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 MRPS25P82663 173 aaKnown RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 CYLC2Q14093 348 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 HIBCHQ6NVY1 386 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 LINC00116Q8NCU8 138 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 GIMAP8Q8ND71 665 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DYDC2Q96IM9 177 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 GJD4Q96KN9 370 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 TDRD3Q9H7E2 651 aaKnown RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 CACYBPQ9HB71 228 aaKnown RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 KIAA1586Q9HCI6 787 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DUX4Q9UBX2 424 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DNAJC12Q9UKB3 198 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 AKT3Q9Y243 479 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 ADGRG1Q9Y653 693 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 POTECB2RU33 542 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 ZMYND10O75800 440 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 CTDNEP1O95476 244 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 KRT1P04264 644 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 IREB2P48200 963 aaKnown RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 KRT76Q01546 638 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DNAJC24Q6P3W2 148 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 SUGP1Q8IWZ8 645 aaKnown RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 CFAP61Q8NHU2 1237 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DACT3Q96B18 629 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 RILPQ96NA2 401 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 FLT1P17948 1338 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 A0A1B0GTH6 734 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 GRID2IPA4D2P6 1211 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 ZNF233A6NK53 670 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 CAPN9O14815 690 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 RASGRF2O14827 1237 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 C21orf2O43822 256 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 AKR1B1P15121 316 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 RFX1P22670 979 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 SFNP31947 248 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 DR1Q01658 176 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 C16orf86Q6ZW13 317 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 FBXO33Q7Z6M2 555 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 MCPH1Q8NEM0 835 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 CXorf38Q8TB03 319 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 EDEM3Q9BZQ6 932 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 HERC5Q9UII4 1024 aaKnown RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 CAPN11Q9UMQ6 739 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 WDR64B1ANS9 1081 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 SGK1O00141 431 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 TEX33O43247 280 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 PALMO75781 387 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 FDPSP14324 419 aaKnown RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 KCNH2Q12809 1159 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 PADI6Q6TGC4 694 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 TBC1D16Q8TBP0 767 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 PIGOQ8TEQ8 1089 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 ANAPC5Q9UJX4 755 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 KIF1AQ12756 1690 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 USP27XA6NNY8 438 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 MIF4GDA9UHW6 222 aaKnown RBP7.73□□□□□ -1.17
CTNND1-218ENST00000528232 H7C0C1 242 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 INO80B-WBP1J3KQ70 363 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 ATP5OP48047 213 aa7.73□□□□□ -1.17
CTNND1-218ENST00000528232 PPP4R1Q8TF05 950 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms