RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 ODR4Q5SWX8 454 aa26.88■■□□□ 1.89
PACSIN3-204ENST00000528201 ALG13Q9NP73 1137 aaKnown RBP26.88■■□□□ 1.89
PACSIN3-204ENST00000528201 RGL1Q9NZL6 768 aa26.88■■□□□ 1.89
PACSIN3-204ENST00000528201 LIMCH1Q9UPQ0 1083 aa26.88■■□□□ 1.89
PACSIN3-204ENST00000528201 BDP1A6H8Y1 2624 aa26.88■■□□□ 1.89
PACSIN3-204ENST00000528201 NCOR1O75376 2440 aa26.88■■□□□ 1.89
PACSIN3-204ENST00000528201 FGFR1P11362 822 aa26.87■■□□□ 1.89
PACSIN3-204ENST00000528201 DNAJB1P25685 340 aa26.87■■□□□ 1.89
PACSIN3-204ENST00000528201 FAM43BQ6ZT52 329 aaPredicted RBP26.87■■□□□ 1.89
PACSIN3-204ENST00000528201 CCDC83Q8IWF9 413 aa26.87■■□□□ 1.89
PACSIN3-204ENST00000528201 NAP1L4Q99733 375 aaKnown RBP26.87■■□□□ 1.89
PACSIN3-204ENST00000528201 PLVAPQ9BX97 442 aa26.87■■□□□ 1.89
PACSIN3-204ENST00000528201 BRMS1Q9HCU9 246 aa26.87■■□□□ 1.89
PACSIN3-204ENST00000528201 RNF19AQ9NV58 838 aa26.87■■□□□ 1.89
PACSIN3-204ENST00000528201 PLAGL2Q9UPG8 496 aa26.87■■□□□ 1.89
PACSIN3-204ENST00000528201 MAFO75444 373 aaPredicted RBP26.86■■□□□ 1.89
PACSIN3-204ENST00000528201 CSPG5O95196 566 aa26.86■■□□□ 1.89
PACSIN3-204ENST00000528201 P4HBP07237 508 aaKnown RBP26.86■■□□□ 1.89
PACSIN3-204ENST00000528201 KCNA5P22460 613 aa26.86■■□□□ 1.89
PACSIN3-204ENST00000528201 EPHA7Q15375 998 aa26.86■■□□□ 1.89
PACSIN3-204ENST00000528201 NLRP7Q8WX94 980 aa26.86■■□□□ 1.89
PACSIN3-204ENST00000528201 NSUN3Q9H649 340 aaKnown RBP26.86■■□□□ 1.89
PACSIN3-204ENST00000528201 CYP26B1Q9NR63 512 aa26.86■■□□□ 1.89
PACSIN3-204ENST00000528201 WDR81Q562E7 1941 aa26.86■■□□□ 1.89
PACSIN3-204ENST00000528201 TBKBP1A7MCY6 615 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 ITGB1P05556 798 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 GUCY1B3Q02153 619 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 COL19A1Q14993 1142 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 NCAPH2Q6IBW4 605 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 KSR1Q8IVT5 923 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 ZNF710Q8N1W2 664 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 KLHL23Q8NBE8 558 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 SCLT1Q96NL6 688 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 LXNQ9BS40 222 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 LMAN2LQ9H0V9 348 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 TMEM161AQ9NX61 479 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 SUCLA2Q9P2R7 463 aaPredicted RBP26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 NLRC5Q86WI3 1866 aa26.85■■□□□ 1.89
PACSIN3-204ENST00000528201 ZBTB39O15060 712 aa26.84■■□□□ 1.89
PACSIN3-204ENST00000528201 SPPL3Q8TCT6 385 aa26.84■■□□□ 1.89
PACSIN3-204ENST00000528201 P2RX5Q93086 422 aa26.84■■□□□ 1.89
PACSIN3-204ENST00000528201 DYDC2Q96IM9 177 aa26.84■■□□□ 1.89
PACSIN3-204ENST00000528201 ATP6V0A4Q9HBG4 840 aa26.84■■□□□ 1.89
PACSIN3-204ENST00000528201 RALGAPA2Q2PPJ7 1873 aa26.84■■□□□ 1.89
PACSIN3-204ENST00000528201 A0A087WZ62 844 aa26.83■■□□□ 1.89
PACSIN3-204ENST00000528201 MARCH6O60337 910 aa26.83■■□□□ 1.89
PACSIN3-204ENST00000528201 CTTNQ14247 550 aaKnown RBP26.83■■□□□ 1.89
PACSIN3-204ENST00000528201 LEXMQ3ZCV2 418 aa26.83■■□□□ 1.89
PACSIN3-204ENST00000528201 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.83■■□□□ 1.89
PACSIN3-204ENST00000528201 FDXACB1Q9BRP7 624 aaPredicted RBP26.83■■□□□ 1.89
PACSIN3-204ENST00000528201 ELAC1Q9H777 363 aaKnown RBP26.83■■□□□ 1.89
PACSIN3-204ENST00000528201 TCF20Q9UGU0 1960 aaKnown RBP26.82■■□□□ 1.88
PACSIN3-204ENST00000528201 CYP4A11Q02928 519 aa26.82■■□□□ 1.88
PACSIN3-204ENST00000528201 TRIM29Q14134 588 aa26.82■■□□□ 1.88
PACSIN3-204ENST00000528201 ECHDC2Q86YB7 292 aa26.82■■□□□ 1.88
PACSIN3-204ENST00000528201 RHPN2Q8IUC4 686 aa26.82■■□□□ 1.88
PACSIN3-204ENST00000528201 C4orf19Q8IY42 314 aa26.82■■□□□ 1.88
PACSIN3-204ENST00000528201 SLFN12Q8IYM2 578 aa26.82■■□□□ 1.88
PACSIN3-204ENST00000528201 TYW1Q9NV66 732 aaKnown RBP26.82■■□□□ 1.88
PACSIN3-204ENST00000528201 H3BQ06 376 aaPredicted RBP26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 ATF7P17544 494 aaPredicted RBP26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 GTF2F1P35269 517 aaKnown RBP eCLIP26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 IRS1P35568 1242 aa26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 DNM2P50570 870 aa26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 HYAL1Q12794 435 aa26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 CALCRLQ16602 461 aa26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 NEK9Q8TD19 979 aa26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 PABPC5Q96DU9 382 aaKnown RBP26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 CEP170P1Q96L14 293 aa26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 CASD1Q96PB1 797 aa26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 MTMR9Q96QG7 549 aa26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 GCOM2Q9BZD3 368 aaPredicted RBP26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 TMEM60Q9H2L4 133 aa26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 DHX33Q9H6R0 707 aaKnown RBP26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 BMP2KQ9NSY1 1161 aaPredicted RBP26.81■■□□□ 1.88
PACSIN3-204ENST00000528201 NEMFO60524 1076 aa26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 SLITRK3O94933 977 aa26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 BAG4O95429 457 aaKnown RBP26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 ZSCAN20P17040 1043 aaPredicted RBP26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 YWHABP31946 246 aaKnown RBP26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 NAALADL2Q58DX5 795 aa26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 LRRC55Q6ZSA7 311 aa26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 ZNF598Q86UK7 904 aaKnown RBP26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 TMEM143Q96AN5 459 aa26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 NLRP4Q96MN2 994 aa26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 CWH43Q9H720 699 aa26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 PCDHGC5Q9Y5F6 944 aa26.8■■□□□ 1.88
PACSIN3-204ENST00000528201 DKC1O60832 514 aaKnown RBP eCLIP26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 LTBRP36941 435 aa26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 CLLU1OSQ5K130 101 aa26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 ZNF410Q86VK4 478 aa26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 POF1BQ8WVV4 589 aa26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 HSD17B14Q9BPX1 270 aa26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 EIF2AK1Q9BQI3 630 aaKnown RBP26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 LLPHQ9BRT6 129 aaKnown RBP26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 ZSWIM4Q9H7M6 989 aa26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 IFT122Q9HBG6 1241 aa26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 PCDHA12Q9UN75 941 aa26.79■■□□□ 1.88
PACSIN3-204ENST00000528201 A0A0U1RQF3 1178 aa26.78■■□□□ 1.88
PACSIN3-204ENST00000528201 RBM25P49756 843 aaKnown RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms