RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CHST12Q9NRB3 414 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 CLDND1Q9NY35 253 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 DACT1Q9NYF0 836 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 PRKAG3Q9UGI9 489 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 SEPT9Q9UHD8 586 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-212ENST00000527887 RALGAPA2Q2PPJ7 1873 aa15.94■□□□□ 0.14
CAPN1-212ENST00000527887 TBKBP1A7MCY6 615 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 DDX11L8A8MPP1 907 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 SLC37A4O43826 429 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 MARCH6O60337 910 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 CCNT1O60563 726 aaKnown RBP15.93■□□□□ 0.14
CAPN1-212ENST00000527887 MAFO75444 373 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-212ENST00000527887 BAG4O95429 457 aaKnown RBP15.93■□□□□ 0.14
CAPN1-212ENST00000527887 CTDNEP1O95476 244 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 EOMESO95936 686 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 HYAL1Q12794 435 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 CAMK1Q14012 370 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 MTERF2Q49AM1 385 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 SPOUT1Q5T280 376 aaKnown RBP15.93■□□□□ 0.14
CAPN1-212ENST00000527887 FAM102BQ5T8I3 360 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 ZNF410Q86VK4 478 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 SLFN12Q8IYM2 578 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 POF1BQ8WVV4 589 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 NLRP7Q8WX94 980 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 SCLT1Q96NL6 688 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 PPP1R16BQ96T49 567 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 BRWD1Q9NSI6 2320 aa15.93■□□□□ 0.14
CAPN1-212ENST00000527887 A0A0U1RQF3 1178 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 CARNS1A5YM72 827 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 H3BQ06 376 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-212ENST00000527887 SKIP12755 728 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 LAG3P18627 525 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 KRT2P35908 639 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 EPHA7Q15375 998 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 EP400NLQ6ZTU2 488 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 PIK3AP1Q6ZUJ8 805 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 ECHDC2Q86YB7 292 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 ABI1Q8IZP0 508 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 GJD3Q8N144 294 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 GTF3C6Q969F1 213 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 TRAIPQ9BWF2 469 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 TYW1Q9NV66 732 aaKnown RBP15.92■□□□□ 0.14
CAPN1-212ENST00000527887 VAV3Q9UKW4 847 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 LZTS1Q9Y250 596 aa15.92■□□□□ 0.14
CAPN1-212ENST00000527887 GAS2O43903 313 aaKnown RBP15.91■□□□□ 0.14
CAPN1-212ENST00000527887 SFPQP23246 707 aaKnown RBP eCLIP15.91■□□□□ 0.14
CAPN1-212ENST00000527887 LTBRP36941 435 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 GATMP50440 423 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 NEK4P51957 841 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 PLCB3Q01970 1234 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 ADAM15Q13444 863 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 ME3Q16798 604 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 ANO5Q75V66 913 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 OTUD6AQ7L8S5 288 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 C4orf19Q8IY42 314 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 EFHBQ8N7U6 833 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 SLC7A3Q8WY07 619 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 CDCA3Q99618 268 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-212ENST00000527887 CYP26B1Q9NR63 512 aa15.91■□□□□ 0.14
CAPN1-212ENST00000527887 SUCLA2Q9P2R7 463 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-212ENST00000527887 PUF60Q9UHX1 559 aaKnown RBP15.91■□□□□ 0.14
CAPN1-212ENST00000527887 PI4K2BG5E9Z4 385 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 EML1O00423 815 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 FGFR1P11362 822 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 FDPSP14324 419 aaKnown RBP15.9■□□□□ 0.14
CAPN1-212ENST00000527887 IL9P15248 144 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 IBSPP21815 317 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-212ENST00000527887 DNAJB1P25685 340 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 PPM1AP35813 382 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 RFC5P40937 340 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 TRIM29Q14134 588 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 C8orf34Q49A92 452 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 LRRC43Q8N309 656 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 COLGALT1Q8NBJ5 622 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 OXER1Q8TDS5 423 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 HAS1Q92839 578 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 CASD1Q96PB1 797 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 CWH43Q9H720 699 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 ZSWIM4Q9H7M6 989 aa15.9■□□□□ 0.14
CAPN1-212ENST00000527887 MYH9P35579 1960 aaKnown RBP15.89■□□□□ 0.13
CAPN1-212ENST00000527887 A0A087WZ62 844 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 ASAP2O43150 1006 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 FGF18O76093 207 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 ALADP13716 330 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 KRT17Q04695 432 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 DRP2Q13474 957 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 ZNF598Q86UK7 904 aaKnown RBP15.89■□□□□ 0.13
CAPN1-212ENST00000527887 THNSL1Q8IYQ7 743 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 NECAB1Q8N987 351 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 NSUN7Q8NE18 718 aaKnown RBP15.89■□□□□ 0.13
CAPN1-212ENST00000527887 MICAL1Q8TDZ2 1067 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 TNFRSF25Q93038 417 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 CEP170P1Q96L14 293 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 POP1Q99575 1024 aaKnown RBP15.89■□□□□ 0.13
CAPN1-212ENST00000527887 FDXACB1Q9BRP7 624 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-212ENST00000527887 MRPL9Q9BYD2 267 aaKnown RBP15.89■□□□□ 0.13
CAPN1-212ENST00000527887 IGFLR1Q9H665 355 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 DHX33Q9H6R0 707 aaKnown RBP15.89■□□□□ 0.13
CAPN1-212ENST00000527887 TLR9Q9NR96 1032 aa15.89■□□□□ 0.13
CAPN1-212ENST00000527887 GJB4Q9NTQ9 266 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms