RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 TEKT5Q96M29 485 aa4.62□□□□□ -1.67
CLNS1A-208ENST00000527265 CCDC138Q96M89 665 aa4.62□□□□□ -1.67
CLNS1A-208ENST00000527265 ZDHHC15Q96MV8 337 aa4.62□□□□□ -1.67
CLNS1A-208ENST00000527265 RNF38Q9H0F5 515 aa4.62□□□□□ -1.67
CLNS1A-208ENST00000527265 SMOC1Q9H4F8 434 aa4.62□□□□□ -1.67
CLNS1A-208ENST00000527265 CHST7Q9NS84 486 aa4.62□□□□□ -1.67
CLNS1A-208ENST00000527265 INVSQ9Y283 1065 aa4.62□□□□□ -1.67
CLNS1A-208ENST00000527265 DIS3Q9Y2L1 958 aaKnown RBP4.62□□□□□ -1.67
CLNS1A-208ENST00000527265 ZKSCAN5Q9Y2L8 839 aa4.62□□□□□ -1.67
CLNS1A-208ENST00000527265 SF3B6Q9Y3B4 125 aaKnown RBP4.62□□□□□ -1.67
CLNS1A-208ENST00000527265 AQP7O14520 342 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 FFAR3O14843 346 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 TLR5O60602 858 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 PQBP1O60828 265 aaKnown RBP4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 KCNH1O95259 989 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 ATP2A2P16615 1042 aaKnown RBP4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 SDHBP21912 280 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 RPL10P27635 214 aaKnown RBP4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 GRK6P43250 576 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 MAPK9P45984 424 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 KCNJ6P48051 423 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 KPNA1P52294 538 aaPredicted RBP4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 ERVFRD-1P60508 538 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 GUCY1A3Q02108 690 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 TBX2Q13207 712 aaPredicted RBP4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 PDCD2Q16342 344 aaPredicted RBP4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 PRSS53Q2L4Q9 553 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 SLC35F1Q5T1Q4 408 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 GTF2IRD2BQ6EKJ0 949 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 CC2D1AQ6P1N0 951 aaPredicted RBP4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 OTOP3Q7RTS5 596 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 MTDHQ86UE4 582 aaKnown RBP4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 GTF2IRD2Q86UP8 949 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 ZFPM1Q8IX07 1006 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 SPATA5Q8NB90 893 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 FAM156AQ8NDB6 213 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 IL17REQ8NFR9 667 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 CCT6BQ92526 530 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 SLC5A5Q92911 643 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 TBATAQ96M53 351 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 FAM193BQ96PV7 902 aaPredicted RBP4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 ACO2Q99798 780 aaKnown RBP4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 HDAC8Q9BY41 377 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 FAM204AQ9H8W3 233 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 CABP5Q9NP86 173 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 B4GALT6Q9UBX8 382 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 EBF1Q9UH73 591 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 GPR52Q9Y2T5 361 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 PCDHGB6Q9Y5F9 930 aa4.61□□□□□ -1.67
CLNS1A-208ENST00000527265 KLHL33A6NCF5 533 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 RASA4BC9J798 803 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 H0Y8X5 98 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 J3KRW8 73 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 RASA4O43374 803 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 FIBPO43427 364 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 HIP1RO75146 1068 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 VAMP4O75379 141 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 HRGP04196 525 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 APPP05067 770 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 ITGB3P05106 788 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 SNRPB2P08579 225 aaKnown RBP4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 AKAP5P24588 427 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CNR2P34972 360 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CTSKP43235 329 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 LLGL1Q15334 1064 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CLUL1Q15846 466 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 DDB1Q16531 1140 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CCDC96Q2M329 555 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CREB3L3Q68CJ9 461 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CFAP161Q6P656 301 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 PDXDC1Q6P996 788 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CRTC3Q6UUV7 619 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 KCNT2Q6UVM3 1135 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 C16orf54Q6UWD8 224 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CCDC149Q6ZUS6 474 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 RSRC2Q7L4I2 434 aaKnown RBP4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 OVCH2Q7RTZ1 564 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 GPR155Q7Z3F1 870 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 WAPLQ7Z5K2 1190 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 RASSF3Q86WH2 238 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CMIPQ8IY22 773 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 TTC9BQ8N6N2 239 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CHST14Q8NCH0 376 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 DEPTORQ8TB45 409 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 DIS3LQ8TF46 1054 aaKnown RBP4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 GCC1Q96CN9 775 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 CDK5RAP3Q96JB5 506 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 LOXL4Q96JB6 756 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 TBCBQ99426 244 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 C1QTNF3Q9BXJ4 246 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 WDR12Q9GZL7 423 aaKnown RBP4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 RSPH9Q9H1X1 276 aaPredicted RBP4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 PDLIM7Q9NR12 457 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 RRN3Q9NYV6 651 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 H2AFY2Q9P0M6 372 aaPredicted RBP4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 GPR55Q9Y2T6 319 aaPredicted RBP4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 COQ6Q9Y2Z9 468 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 PCDHA8Q9Y5H6 950 aa4.6□□□□□ -1.67
CLNS1A-208ENST00000527265 SSU72P8A0A1W2PR75 194 aa4.59□□□□□ -1.67
CLNS1A-208ENST00000527265 hCG_1642624A0A1W2PR95 340 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms