RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 SAMD11Q96NU1 681 aa12.02□□□□□ -0.49
SYVN1-208ENST00000527142 TGS1Q96RS0 853 aaKnown RBP12.02□□□□□ -0.49
SYVN1-208ENST00000527142 POLR3CQ9BUI4 534 aaPredicted RBP12.02□□□□□ -0.49
SYVN1-208ENST00000527142 RAB34Q9BZG1 259 aa12.02□□□□□ -0.49
SYVN1-208ENST00000527142 CDHR5Q9HBB8 845 aa12.02□□□□□ -0.49
SYVN1-208ENST00000527142 RC3H2Q9HBD1 1191 aaKnown RBP12.02□□□□□ -0.49
SYVN1-208ENST00000527142 SUCLA2Q9P2R7 463 aaPredicted RBP12.02□□□□□ -0.49
SYVN1-208ENST00000527142 ST3GAL5Q9UNP4 418 aa12.02□□□□□ -0.49
SYVN1-208ENST00000527142 STK24Q9Y6E0 443 aa12.02□□□□□ -0.49
SYVN1-208ENST00000527142 DENND3A2RUS2 1198 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 K7ELQ4 463 aaPredicted RBP12.01□□□□□ -0.49
SYVN1-208ENST00000527142 DGAT1O75907 488 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 UPP2O95045 317 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 STAG3L1P0CL83 205 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 SFPQP23246 707 aaKnown RBP eCLIP12.01□□□□□ -0.49
SYVN1-208ENST00000527142 RPA1P27694 616 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 SARSP49591 514 aaKnown RBP12.01□□□□□ -0.49
SYVN1-208ENST00000527142 NFX1Q12986 1120 aaKnown RBP12.01□□□□□ -0.49
SYVN1-208ENST00000527142 DRP2Q13474 957 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 XKR9Q5GH70 373 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
SYVN1-208ENST00000527142 SLC24A5Q71RS6 500 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 BRAPQ7Z569 592 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 CRIPAKQ8N1N5 446 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 PSPC1Q8WXF1 523 aaKnown RBP12.01□□□□□ -0.49
SYVN1-208ENST00000527142 ARNTL2Q8WYA1 636 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 PPP1R16BQ96T49 567 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 SH2D3AQ9BRG2 576 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 GCOM2Q9BZD3 368 aaPredicted RBP12.01□□□□□ -0.49
SYVN1-208ENST00000527142 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.01□□□□□ -0.49
SYVN1-208ENST00000527142 PCDHB6Q9Y5E3 794 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 COL4A3BPQ9Y5P4 624 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 ADGRA3Q8IWK6 1321 aa12.01□□□□□ -0.49
SYVN1-208ENST00000527142 TTC3P53804 2025 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 SPATA31C1P0DKV0 1188 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 POU3F3P20264 500 aaPredicted RBP12□□□□□ -0.49
SYVN1-208ENST00000527142 TECP42680 631 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 PTGDRQ13258 359 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 ADGRE1Q14246 886 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 PDIA5Q14554 519 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 DSC3Q14574 896 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 NBR1Q14596 966 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 RTN4RL1Q86UN2 441 aaPredicted RBP12□□□□□ -0.49
SYVN1-208ENST00000527142 RHPN2Q8IUC4 686 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 IGSF22Q8N9C0 903 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
SYVN1-208ENST00000527142 SNX21Q969T3 373 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 ADAM2Q99965 735 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 INO80BQ9C086 356 aaPredicted RBP12□□□□□ -0.49
SYVN1-208ENST00000527142 ATP6V0A4Q9HBG4 840 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 RGS18Q9NS28 235 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 DBR1Q9UK59 544 aaKnown RBP12□□□□□ -0.49
SYVN1-208ENST00000527142 RWDD3Q9Y3V2 267 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 MYO9BQ13459 2157 aa12□□□□□ -0.49
SYVN1-208ENST00000527142 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 C9IYK1 514 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 RBAK-RBAKDNI3L0D1 243 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 ASAP2O43150 1006 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 GTPBP6O43824 516 aaPredicted RBP11.99□□□□□ -0.49
SYVN1-208ENST00000527142 MGEA5O60502 916 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 DGKIO75912 1065 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 BMP15O95972 392 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 RARRES1P49788 294 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 ATP2C1P98194 919 aaPredicted RBP11.99□□□□□ -0.49
SYVN1-208ENST00000527142 LAMTOR4Q0VGL1 99 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 MXD4Q14582 209 aaPredicted RBP11.99□□□□□ -0.49
SYVN1-208ENST00000527142 CATSPER3Q86XQ3 398 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 CMTR2Q8IYT2 770 aaKnown RBP11.99□□□□□ -0.49
SYVN1-208ENST00000527142 FIBCD1Q8N539 461 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 MCPH1Q8NEM0 835 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 PRPF31Q8WWY3 499 aaKnown RBP11.99□□□□□ -0.49
SYVN1-208ENST00000527142 ZNF689Q96CS4 500 aaPredicted RBP11.99□□□□□ -0.49
SYVN1-208ENST00000527142 NACC1Q96RE7 527 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 MTRQ99707 1265 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 ELAC1Q9H777 363 aaKnown RBP11.99□□□□□ -0.49
SYVN1-208ENST00000527142 DACT1Q9NYF0 836 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 LRWD1Q9UFC0 647 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 LRFN2Q9ULH4 789 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 BDP1A6H8Y1 2624 aa11.99□□□□□ -0.49
SYVN1-208ENST00000527142 REV3LO60673 3130 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 EVPLQ92817 2033 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 A0A087WZ62 844 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 VPS37CA5D8V6 355 aaPredicted RBP11.98□□□□□ -0.49
SYVN1-208ENST00000527142 ZBTB39O15060 712 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 HOXA2O43364 376 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 MED24O75448 989 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 ZSCAN20P17040 1043 aaPredicted RBP11.98□□□□□ -0.49
SYVN1-208ENST00000527142 PHKA2P46019 1235 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 FAM189BP81408 668 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 BTG3Q14201 252 aaPredicted RBP11.98□□□□□ -0.49
SYVN1-208ENST00000527142 PCBP1Q15365 356 aaKnown RBP eCLIP11.98□□□□□ -0.49
SYVN1-208ENST00000527142 ARL6IP4Q66PJ3 421 aaKnown RBP11.98□□□□□ -0.49
SYVN1-208ENST00000527142 POTEGQ6S5H5 508 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 DTHD1Q6ZMT9 781 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 SPRED2Q7Z698 418 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 SRGAP1Q7Z6B7 1085 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 FERMT3Q86UX7 667 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 FBXO22Q8NEZ5 403 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 PIGOQ8TEQ8 1089 aa11.98□□□□□ -0.49
SYVN1-208ENST00000527142 RSPH1Q8WYR4 309 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms