RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 STAT1P42224 750 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 EPHB4P54760 987 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 GHRHRQ02643 423 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 CXCL9Q07325 125 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 PADI6Q6TGC4 694 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 STXBP4Q6ZWJ1 553 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 SLC9A9Q8IVB4 645 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 TSEN2Q8NCE0 465 aaKnown RBP19.16■□□□□ 0.66
USH1C-205ENST00000527020 TPCN2Q8NHX9 752 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 HOOK2Q96ED9 719 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 SYT11Q9BT88 431 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 ZSCAN5CA6NGD5 496 aaPredicted RBP19.16■□□□□ 0.66
USH1C-205ENST00000527020 SOX5P35711 763 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 MRPS9P82933 396 aaKnown RBP19.16■□□□□ 0.66
USH1C-205ENST00000527020 DGKZQ13574 1117 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 PPP2R5AQ15172 486 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 MIER3Q7Z3K6 550 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 USP38Q8NB14 1042 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 CAVIN3Q969G5 261 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 STK33Q9BYT3 514 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 CALCOCO1Q9P1Z2 691 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 UBIAD1Q9Y5Z9 338 aa19.16■□□□□ 0.66
USH1C-205ENST00000527020 PARP14Q460N5 1801 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 WDR81Q562E7 1941 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 GOLGA6BA6NDN3 693 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 NOP2P46087 812 aaKnown RBP19.15■□□□□ 0.66
USH1C-205ENST00000527020 RNASE9P60153 205 aaKnown RBP19.15■□□□□ 0.66
USH1C-205ENST00000527020 SPP2Q13103 211 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 RPS6KA1Q15418 735 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 TKFCQ3LXA3 575 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 EMBQ6PCB8 327 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 NIPA1Q7RTP0 329 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 SLFN11Q7Z7L1 901 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 PRPF38AQ8NAV1 312 aaKnown RBP19.15■□□□□ 0.66
USH1C-205ENST00000527020 AGO4Q9HCK5 861 aaKnown RBP19.15■□□□□ 0.66
USH1C-205ENST00000527020 DNAJC12Q9UKB3 198 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 FRMD4BQ9Y2L6 1034 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 ZHX2Q9Y6X8 837 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 KCNK3O14649 394 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 H2AFZP0C0S5 128 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 DRAP1Q14919 205 aaPredicted RBP19.15■□□□□ 0.66
USH1C-205ENST00000527020 MUM1L1Q5H9M0 696 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 TAF3Q5VWG9 929 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 H2AFVQ71UI9 128 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 NIM1KQ8IY84 436 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 KRT12Q99456 494 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 INTS2Q9H0H0 1204 aaKnown RBP19.15■□□□□ 0.66
USH1C-205ENST00000527020 VPS33BQ9H267 617 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 INTUQ9ULD6 942 aa19.15■□□□□ 0.66
USH1C-205ENST00000527020 A0A0A6YYK5 440 aaPredicted RBP19.14■□□□□ 0.65
USH1C-205ENST00000527020 HEXIM1O94992 359 aaKnown RBP19.14■□□□□ 0.65
USH1C-205ENST00000527020 P4HBP07237 508 aaKnown RBP19.14■□□□□ 0.65
USH1C-205ENST00000527020 ACTN2P35609 894 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 CARSP49589 748 aaKnown RBP19.14■□□□□ 0.65
USH1C-205ENST00000527020 BFSP1Q12934 665 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 PLS1Q14651 629 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 IFI16Q16666 785 aaKnown RBP19.14■□□□□ 0.65
USH1C-205ENST00000527020 ZSCAN26Q16670 478 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 MAEAQ7L5Y9 396 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 VPS36Q86VN1 386 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 LMO3Q8TAP4 145 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 GOLGA5Q8TBA6 731 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 U2AF1L4Q8WU68 220 aaKnown RBP19.14■□□□□ 0.65
USH1C-205ENST00000527020 TEPSINQ96N21 525 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 PLEKHA4Q9H4M7 779 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 STXBP5LQ9Y2K9 1186 aa19.14■□□□□ 0.65
USH1C-205ENST00000527020 TISP43B9A030 160 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 K7ENM7 598 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 WDR46O15213 610 aaKnown RBP19.13■□□□□ 0.65
USH1C-205ENST00000527020 CAPN2P17655 700 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 RARRES1P49788 294 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 PTPROQ16827 1216 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 PCNX4Q63HM2 1172 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 TAF4BQ92750 862 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 ESYT3A0FGR9 886 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 EXOC3O60645 756 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 GALCP54803 685 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 MYL7Q01449 175 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 MYBPC2Q14324 1141 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 RASA3Q14644 834 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 GLYCTKQ8IVS8 523 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 SYCP3Q8IZU3 236 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 CPXCR1Q8N123 301 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 SYTL5Q8TDW5 730 aaPredicted RBP19.13■□□□□ 0.65
USH1C-205ENST00000527020 AFAP1L1Q8TED9 768 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 SH3GL2Q99962 352 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 SLC38A10Q9HBR0 1119 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 RAVER2Q9HCJ3 691 aaKnown RBP19.13■□□□□ 0.65
USH1C-205ENST00000527020 EPB41L5Q9HCM4 733 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 MYOZ2Q9NPC6 264 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 APEX2Q9UBZ4 518 aa19.13■□□□□ 0.65
USH1C-205ENST00000527020 DBR1Q9UK59 544 aaKnown RBP19.13■□□□□ 0.65
USH1C-205ENST00000527020 ALAS1P13196 640 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 DLG4P78352 724 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 GUCY2DQ02846 1103 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 PHLDB3Q6NSJ2 640 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 IFT20Q8IY31 132 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 METTL13Q8N6R0 699 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 RDH13Q8NBN7 331 aa19.12■□□□□ 0.65
USH1C-205ENST00000527020 ACTRT1Q8TDG2 376 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms