RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 MAP7D2Q96T17 732 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
SSBP3-210ENST00000525990 RAPGEFL1Q9UHV5 662 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 PLAGL2Q9UPG8 496 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 PCDHB7Q9Y5E2 793 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 NCOR1O75376 2440 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 DDX11L8A8MPP1 907 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 ZBTB39O15060 712 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 MMP1P03956 469 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 EIF4BP23588 611 aaKnown RBP13.55□□□□□ -0.24
SSBP3-210ENST00000525990 LTBRP36941 435 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 PPP2R5CQ13362 524 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 COL19A1Q14993 1142 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 ANKRD1Q15327 319 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 CLUL1Q15846 466 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 LEXMQ3ZCV2 418 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 XKR3Q5GH77 459 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 PPP4R3AQ6IN85 833 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 FAM177A1Q8N128 213 aaPredicted RBP13.55□□□□□ -0.24
SSBP3-210ENST00000525990 RDM1Q8NG50 284 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 SPPL3Q8TCT6 385 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 NEK9Q8TD19 979 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 SCLT1Q96NL6 688 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 NIFKQ9BYG3 293 aaKnown RBP13.55□□□□□ -0.24
SSBP3-210ENST00000525990 CLDND1Q9NY35 253 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 RGL1Q9NZL6 768 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 RWDD3Q9Y3V2 267 aa13.55□□□□□ -0.24
SSBP3-210ENST00000525990 A0A087WZ62 844 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 IGKV6-21A0A0C4DH24 114 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 TBX10O75333 385 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 DARSP14868 501 aaKnown RBP13.54□□□□□ -0.24
SSBP3-210ENST00000525990 XBP1P17861 261 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 TMOD1P28289 359 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 KRT2P35908 639 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 PBX3P40426 434 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 FAM189BP81408 668 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 GUCY1B3Q02153 619 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 NCAPH2Q6IBW4 605 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 PTCRAQ6ISU1 281 aaPredicted RBP13.54□□□□□ -0.24
SSBP3-210ENST00000525990 LRRC55Q6ZSA7 311 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 POF1BQ8WVV4 589 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 NLRP7Q8WX94 980 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 P2RX5Q93086 422 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 PABPC5Q96DU9 382 aaKnown RBP13.54□□□□□ -0.24
SSBP3-210ENST00000525990 FDXACB1Q9BRP7 624 aaPredicted RBP13.54□□□□□ -0.24
SSBP3-210ENST00000525990 PLVAPQ9BX97 442 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 IGFLR1Q9H665 355 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 CWH43Q9H720 699 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 C1orf112Q9NSG2 853 aa13.54□□□□□ -0.24
SSBP3-210ENST00000525990 TYW1Q9NV66 732 aaKnown RBP13.54□□□□□ -0.24
SSBP3-210ENST00000525990 BDP1A6H8Y1 2624 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 ATF7P17544 494 aaPredicted RBP13.53□□□□□ -0.24
SSBP3-210ENST00000525990 PSMC5P62195 406 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 RBM10P98175 930 aaKnown RBP13.53□□□□□ -0.24
SSBP3-210ENST00000525990 CYP4A11Q02928 519 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 LONRF3Q496Y0 759 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 SPOUT1Q5T280 376 aaKnown RBP13.53□□□□□ -0.24
SSBP3-210ENST00000525990 RHPN2Q8IUC4 686 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 RNF169Q8NCN4 708 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 DYDC2Q96IM9 177 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 CASD1Q96PB1 797 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 LMAN2LQ9H0V9 348 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 EPHX3Q9H6B9 360 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 ATP6V0A4Q9HBG4 840 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
SSBP3-210ENST00000525990 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 MEIS3P2A8K0S8 358 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 MAFO75444 373 aaPredicted RBP13.52□□□□□ -0.25
SSBP3-210ENST00000525990 GCFC2P16383 781 aaKnown RBP13.52□□□□□ -0.25
SSBP3-210ENST00000525990 QARSP47897 775 aaKnown RBP13.52□□□□□ -0.25
SSBP3-210ENST00000525990 CTTNQ14247 550 aaKnown RBP13.52□□□□□ -0.25
SSBP3-210ENST00000525990 CTC1Q2NKJ3 1217 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 C8orf34Q49A92 452 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 CLLU1OSQ5K130 101 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 ODR4Q5SWX8 454 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 RBM23Q86U06 439 aaKnown RBP13.52□□□□□ -0.25
SSBP3-210ENST00000525990 ECHDC2Q86YB7 292 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 CCDC83Q8IWF9 413 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 DIS3L2Q8IYB7 885 aaKnown RBP13.52□□□□□ -0.25
SSBP3-210ENST00000525990 COLGALT1Q8NBJ5 622 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 FAM20AQ96MK3 541 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 NLRP4Q96MN2 994 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 KIF2CQ99661 725 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 LXNQ9BS40 222 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 CYP26B1Q9NR63 512 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 SUCLA2Q9P2R7 463 aaPredicted RBP13.52□□□□□ -0.25
SSBP3-210ENST00000525990 C5orf42Q9H799 3197 aa13.52□□□□□ -0.25
SSBP3-210ENST00000525990 TDRD15B5MCY1 1934 aaKnown RBP13.51□□□□□ -0.25
SSBP3-210ENST00000525990 A0A087WWV3 80 aa13.51□□□□□ -0.25
SSBP3-210ENST00000525990 FGF18O76093 207 aa13.51□□□□□ -0.25
SSBP3-210ENST00000525990 ERVFC1P60507 584 aa13.51□□□□□ -0.25
SSBP3-210ENST00000525990 FAM178BQ8IXR5 827 aa13.51□□□□□ -0.25
SSBP3-210ENST00000525990 HELQQ8TDG4 1101 aa13.51□□□□□ -0.25
SSBP3-210ENST00000525990 WASF1Q92558 559 aa13.51□□□□□ -0.25
SSBP3-210ENST00000525990 LPPQ93052 612 aa13.51□□□□□ -0.25
SSBP3-210ENST00000525990 TMEM143Q96AN5 459 aa13.51□□□□□ -0.25
SSBP3-210ENST00000525990 ELAC1Q9H777 363 aaKnown RBP13.51□□□□□ -0.25
SSBP3-210ENST00000525990 PER2O15055 1255 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms