RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 CHRNA3P32297 505 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 SPIRE1Q08AE8 756 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 AP3B2Q13367 1082 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 GRIK5Q16478 980 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 Q4G0T1 1027 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 POTEBQ6S5H4 581 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 ZDHHC24Q6UX98 284 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 MARCH10Q8NA82 808 aaPredicted RBP8.67□□□□□ -1.02
BDNF-213ENST00000525950 LINC00116Q8NCU8 138 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 LNX1Q8TBB1 728 aaPredicted RBP8.67□□□□□ -1.02
BDNF-213ENST00000525950 GOLPH3Q9H4A6 298 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 BATF3Q9NR55 127 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 PNMA2Q9UL42 364 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 ATP8A1Q9Y2Q0 1164 aa8.67□□□□□ -1.02
BDNF-213ENST00000525950 AFF2P51816 1311 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 FRMPD4Q14CM0 1322 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 TTLL1O95922 423 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 NR3C1P04150 777 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 SSBP05455 408 aaKnown RBP eCLIP8.66□□□□□ -1.02
BDNF-213ENST00000525950 GAP43P17677 238 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 PTGIRP43119 386 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 GRAPQ13588 217 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 DCAF12L1Q5VU92 463 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 C11orf63Q6NUN7 778 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 RHOT2Q8IXI1 618 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 GBP7Q8N8V2 638 aaPredicted RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 GRAPLQ8TC17 118 aaPredicted RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 U2AF1L4Q8WU68 220 aaKnown RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 N4BP2L2Q92802 583 aaPredicted RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 PLCD4Q9BRC7 762 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 CELF4Q9BZC1 486 aaKnown RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 KANSL2Q9H9L4 492 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 NOD2Q9HC29 1040 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 SAMD15Q9P1V8 674 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 DNM3Q9UQ16 869 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 ASTN1O14525 1302 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 UBE4BO95155 1302 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 SYNGAP1Q96PV0 1343 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 NPHP3-ACAD11A0A0J9YXS1 232 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 ANKRD62A6NC57 917 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 PHF2O75151 1096 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 OAS1P00973 400 aaKnown RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 KRT18P05783 430 aaKnown RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 CTNNA2P26232 953 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 CASP5P51878 434 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 ZNF131P52739 623 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 ENOX2Q16206 610 aaKnown RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 UBE2SQ16763 222 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 BICDL1Q6ZP65 573 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 NBPF5PQ86XG9 351 aaPredicted RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 JAMLQ86YT9 394 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 CCDC63Q8NA47 563 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 CTNNBL1Q8WYA6 563 aaPredicted RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 RNF25Q96BH1 459 aaPredicted RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 GCNT4Q9P109 453 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 FRMPD2Q68DX3 1309 aaPredicted RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 GREB1LQ9C091 1923 aaPredicted RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 RGS16O15492 202 aaPredicted RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 EVI5O60447 810 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 VCAM1P19320 739 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 CYP1B1Q16678 543 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 ZNF568Q3ZCX4 644 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 TRPM8Q7Z2W7 1104 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 ETNPPLQ8TBG4 499 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 TBC1D22AQ8WUA7 517 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 FAM20AQ96MK3 541 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 RPS6KC1Q96S38 1066 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 DPH5Q9H2P9 285 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 GRHL1Q9NZI5 618 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 MTRF1LQ9UGC7 380 aaKnown RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 AJAP1Q9UKB5 411 aaPredicted RBP8.66□□□□□ -1.02
BDNF-213ENST00000525950 PPP1R9AQ9ULJ8 1098 aa8.66□□□□□ -1.02
BDNF-213ENST00000525950 RARGP13631 454 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 GALNTL6Q49A17 601 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 CYFIP1Q7L576 1253 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 TAOK1Q7L7X3 1001 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 CATSPER3Q86XQ3 398 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 MDM1Q8TC05 714 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 TRIM51Q9BSJ1 452 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 POLR3CQ9BUI4 534 aaPredicted RBP8.65□□□□□ -1.02
BDNF-213ENST00000525950 INTS9Q9NV88 658 aaKnown RBP8.65□□□□□ -1.02
BDNF-213ENST00000525950 PCDHA3Q9Y5H8 950 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 NRAPQ86VF7 1730 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 RPTORQ8N122 1335 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 PPP1R12BO60237 982 aaPredicted RBP8.65□□□□□ -1.02
BDNF-213ENST00000525950 RPS6KA4O75676 772 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 SPATA31C1P0DKV0 1188 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 PSMC2P35998 433 aaKnown RBP8.65□□□□□ -1.02
BDNF-213ENST00000525950 PDE6CP51160 858 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 KIF22Q14807 665 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 PPP2R5AQ15172 486 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 SFR1Q86XK3 245 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 CEP57Q86XR8 500 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 ACSBG1Q96GR2 724 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 REEP2Q9BRK0 252 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 JAG2Q9Y219 1238 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 NR2E1Q9Y466 385 aa8.65□□□□□ -1.02
BDNF-213ENST00000525950 SPDYE3A6NKU9 549 aa8.65□□□□□ -1.03
BDNF-213ENST00000525950 MTA2O94776 668 aa8.65□□□□□ -1.03
BDNF-213ENST00000525950 SHBGP04278 402 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms