RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 PPME1Q9Y570 386 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 PCDHB12Q9Y5F1 795 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 RALGAPA2Q2PPJ7 1873 aa13.05□□□□□ -0.32
HIF3A-209ENST00000525854 SPTBN5Q9NRC6 3674 aaKnown RBP13.04□□□□□ -0.32
HIF3A-209ENST00000525854 EML1O00423 815 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 DTNBO60941 627 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 MAFO75444 373 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-209ENST00000525854 GATMP50440 423 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 NR5A1Q13285 461 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 EPHA7Q15375 998 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 CSPP1Q1MSJ5 1256 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 FAM102BQ5T8I3 360 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 EP400NLQ6ZTU2 488 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 ANO5Q75V66 913 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 ZNF410Q86VK4 478 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 POTEDQ86YR6 584 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 ABI1Q8IZP0 508 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 KLHL23Q8NBE8 558 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 NEK9Q8TD19 979 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 SLC7A3Q8WY07 619 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 HAS1Q92839 578 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 TNFRSF25Q93038 417 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 CEP89Q96ST8 783 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 INO80BQ9C086 356 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-209ENST00000525854 ALG13Q9NP73 1137 aaKnown RBP13.04□□□□□ -0.32
HIF3A-209ENST00000525854 CYP26B1Q9NR63 512 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 DACT1Q9NYF0 836 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 SUCLA2Q9P2R7 463 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-209ENST00000525854 LIMCH1Q9UPQ0 1083 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 FAM50BQ9Y247 325 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 EVPLQ92817 2033 aa13.04□□□□□ -0.32
HIF3A-209ENST00000525854 TMEM150BA6NC51 233 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 SEC24BO95487 1268 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 ITGB1P05556 798 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 SFPQP23246 707 aaKnown RBP eCLIP13.03□□□□□ -0.32
HIF3A-209ENST00000525854 RFC5P40937 340 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 UBE3AQ05086 875 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 DRP2Q13474 957 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 SAFBQ15424 915 aaKnown RBP eCLIP13.03□□□□□ -0.32
HIF3A-209ENST00000525854 EARS2Q5JPH6 523 aaKnown RBP13.03□□□□□ -0.32
HIF3A-209ENST00000525854 PTCRAQ6ISU1 281 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-209ENST00000525854 OTUD6AQ7L8S5 288 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 C4orf19Q8IY42 314 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 DIS3L2Q8IYB7 885 aaKnown RBP13.03□□□□□ -0.32
HIF3A-209ENST00000525854 SPPL3Q8TCT6 385 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 ZNF668Q96K58 619 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-209ENST00000525854 CEP170P1Q96L14 293 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 TMEM117Q9H0C3 514 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 CHST12Q9NRB3 414 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 CLDND1Q9NY35 253 aa13.03□□□□□ -0.32
HIF3A-209ENST00000525854 NLRC5Q86WI3 1866 aa13.02□□□□□ -0.32
HIF3A-209ENST00000525854 A0A0U1RQF3 1178 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 BTBD18B2RXH4 712 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 H3BQ06 376 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-209ENST00000525854 JAK2O60674 1132 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 EOMESO95936 686 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 FGFR1P11362 822 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 LAG3P18627 525 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 POLGP54098 1239 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-209ENST00000525854 CALCRLQ16602 461 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 PLA2G4FQ68DD2 849 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 NCAPH2Q6IBW4 605 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 ECHDC2Q86YB7 292 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 RHPN2Q8IUC4 686 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 THNSL1Q8IYQ7 743 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 LRRC43Q8N309 656 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-209ENST00000525854 POF1BQ8WVV4 589 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 SH2D3AQ9BRG2 576 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 LXNQ9BS40 222 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 ZSWIM4Q9H7M6 989 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 TYW1Q9NV66 732 aaKnown RBP13.02□□□□□ -0.33
HIF3A-209ENST00000525854 PCDHA12Q9UN75 941 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 MYO7AQ13402 2215 aa13.02□□□□□ -0.33
HIF3A-209ENST00000525854 LOXHD1Q8IVV2 1947 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 A0A087WZ62 844 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 FAM205CA6NFA0 338 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 GRXCR2A6NFK2 248 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 GAS2O43903 313 aaKnown RBP13.01□□□□□ -0.33
HIF3A-209ENST00000525854 NEMFO60524 1076 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 SKIP12755 728 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 DNAJB1P25685 340 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 YWHABP31946 246 aaKnown RBP13.01□□□□□ -0.33
HIF3A-209ENST00000525854 NPEPPSP55786 919 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 SPIRE1Q08AE8 756 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 HYAL1Q12794 435 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 CAMK1Q14012 370 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 CTC1Q2NKJ3 1217 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 COLGALT1Q8NBJ5 622 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 RNF169Q8NCN4 708 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 TCP11Q8WWU5 503 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 PSPC1Q8WXF1 523 aaKnown RBP13.01□□□□□ -0.33
HIF3A-209ENST00000525854 RSPH1Q8WYR4 309 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 ZSCAN31Q96LW9 406 aaPredicted RBP13.01□□□□□ -0.33
HIF3A-209ENST00000525854 NLRP4Q96MN2 994 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 FDXACB1Q9BRP7 624 aaPredicted RBP13.01□□□□□ -0.33
HIF3A-209ENST00000525854 LLPHQ9BRT6 129 aaKnown RBP13.01□□□□□ -0.33
HIF3A-209ENST00000525854 C1QTNF1Q9BXJ1 281 aa13.01□□□□□ -0.33
HIF3A-209ENST00000525854 DHX33Q9H6R0 707 aaKnown RBP13.01□□□□□ -0.33
HIF3A-209ENST00000525854 TCF20Q9UGU0 1960 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms