RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 RAPGEF3O95398 923 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 ADH4P08319 380 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 ZBTB48P10074 688 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 ROM1Q03395 351 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 C2orf27AQ580R0 203 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 NOP9Q86U38 636 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 THEMISQ8N1K5 641 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 ANKRD53Q8N9V6 530 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 OR5AN1Q8NGI8 311 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 SH3TC2Q8TF17 1288 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 RABGGTAQ92696 567 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 LPPQ93052 612 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 GFM2Q969S9 779 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 E2F7Q96AV8 911 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 RPL10LQ96L21 214 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 PCIF1Q9H4Z3 704 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 AURKAIP1Q9NWT8 199 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 SAMD15Q9P1V8 674 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 HECAQ9UBI9 543 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 DENND2AQ9ULE3 1009 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 SH3BP1Q9Y3L3 701 aa3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 CTDP1Q9Y5B0 961 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-218ENST00000525745 PMS2P1A4D2B8 440 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 KCNQ2O43526 872 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 MAFO75444 373 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 GLRX3O76003 335 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 PRLP01236 227 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 ADCY7P51828 1080 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 SESN2P58004 480 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 BPIFB4P59827 614 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 RRP1BQ14684 758 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 DGKDQ16760 1214 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 ARHGAP44Q17R89 818 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 FNDC7Q5VTL7 733 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 PRAMEF9Q5VWM5 478 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 SPTY2D1Q68D10 685 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 SLFN12LQ6IEE8 588 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 ZCCHC8Q6NZY4 707 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 OTOP1Q7RTM1 612 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 JMYQ8N9B5 988 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 CHST14Q8NCH0 376 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 ZNF483Q8TF39 744 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 SLC7A6OSQ96CW6 309 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 MPHOSPH9Q99550 1183 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 SLC6A15Q9H2J7 730 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 IKZF4Q9H2S9 585 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 PARPBPQ9NWS1 579 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 C11orf21Q9P2W6 132 aa3.81□□□□□ -1.8
ECHDC1-218ENST00000525745 UBA6A0AVT1 1052 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 TLDC2A0PJX2 215 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 PTPDC1A2A3K4 754 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 C2orf78A6NCI8 922 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 B4E1Z4 1266 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 PLD2O14939 933 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 OPA1O60313 960 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 MAKP20794 623 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 IGFALSP35858 605 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 FNTBP49356 437 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 MECP2P51608 486 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 ANTXR2P58335 489 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 DPTQ07507 201 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 TCIRG1Q13488 830 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 CNGB1Q14028 1251 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 TTC38Q5R3I4 469 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 GAREM2Q75VX8 874 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 TMPRSS6Q8IU80 811 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 ANKRD35Q8N283 1001 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 AMER2Q8N7J2 671 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 CLIP3Q96DZ5 547 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 MAML3Q96JK9 1138 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 RNPC3Q96LT9 517 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 TUBGCP5Q96RT8 1024 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 CEP89Q96ST8 783 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 GPHA2Q96T91 129 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 ZNF703Q9H7S9 590 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 CABP5Q9NP86 173 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 SLC2A4RGQ9NR83 387 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 CEP72Q9P209 647 aa3.8□□□□□ -1.8
ECHDC1-218ENST00000525745 A0A087X1B8 175 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 UBE2QL1A1L167 161 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 H7C1D1 291 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 DVL2O14641 736 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 SCNN1GP51170 649 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 INHBCP55103 352 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 ZNF460Q14592 562 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 ZNF174Q15697 407 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 ELAVL1Q15717 326 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 SMN1Q16637 294 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 KRT40Q6A162 431 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 Q6ZRM9 215 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 HOMER1Q86YM7 354 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 GSPT2Q8IYD1 628 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 KIAA1958Q8N8K9 716 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 LARP4BQ92615 738 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 APPBP2Q92624 585 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 MIEF2Q96C03 454 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 DYDC2Q96IM9 177 aa3.79□□□□□ -1.8
ECHDC1-218ENST00000525745 WDR92Q96MX6 357 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms