RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 NPAS4Q8IUM7 802 aa20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 CRIPAKQ8N1N5 446 aa20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 GDPD5Q8WTR4 605 aa20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 SLC7A3Q8WY07 619 aa20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 ADAM2Q99965 735 aa20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 C17orf80Q9BSJ5 609 aa20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 DHX33Q9H6R0 707 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 SUCLA2Q9P2R7 463 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 MTCH2Q9Y6C9 303 aa20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 ADGRA3Q8IWK6 1321 aa20.69■□□□□ 0.9
TSPAN4-215ENST00000525334 DENND3A2RUS2 1198 aa20.68■□□□□ 0.9
TSPAN4-215ENST00000525334 LPXNO60711 386 aa20.68■□□□□ 0.9
TSPAN4-215ENST00000525334 DGKIO75912 1065 aa20.68■□□□□ 0.9
TSPAN4-215ENST00000525334 RFC5P40937 340 aa20.68■□□□□ 0.9
TSPAN4-215ENST00000525334 TECP42680 631 aa20.68■□□□□ 0.9
TSPAN4-215ENST00000525334 XKR9Q5GH70 373 aa20.68■□□□□ 0.9
TSPAN4-215ENST00000525334 MCTP1Q6DN14 999 aa20.68■□□□□ 0.9
TSPAN4-215ENST00000525334 RHPN2Q8IUC4 686 aa20.68■□□□□ 0.9
TSPAN4-215ENST00000525334 RGS18Q9NS28 235 aa20.68■□□□□ 0.9
TSPAN4-215ENST00000525334 BMP2KQ9NSY1 1161 aaPredicted RBP20.68■□□□□ 0.9
TSPAN4-215ENST00000525334 H3BQV1 296 aa20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 STAG3L1P0CL83 205 aa20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 IBSPP21815 317 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 SARSP49591 514 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 CDC42EP1Q00587 391 aa20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 DSC3Q14574 896 aa20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 EXOC8Q8IYI6 725 aa20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 MICALL1Q8N3F8 863 aa20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 C4orf32Q8N8J7 132 aa20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 ZNF689Q96CS4 500 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 PRDM6Q9NQX0 595 aa20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 C1orf112Q9NSG2 853 aa20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 PCDHB6Q9Y5E3 794 aa20.67■□□□□ 0.9
TSPAN4-215ENST00000525334 CUL9Q8IWT3 2517 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 A0A087WZ62 844 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 GTPBP6O43824 516 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 SPATA31C1P0DKV0 1188 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 FGFR4P22455 802 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 CUL4AQ13619 759 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 EMC2Q15006 297 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 SLC24A5Q71RS6 500 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 ZNF410Q86VK4 478 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 KSR1Q8IVT5 923 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 FIBCD1Q8N539 461 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 FBXO22Q8NEZ5 403 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 TMEM143Q96AN5 459 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 NLRP4Q96MN2 994 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 SAMD11Q96NU1 681 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 FDXACB1Q9BRP7 624 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 GCOM2Q9BZD3 368 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 LRFN2Q9ULH4 789 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 NLRC5Q86WI3 1866 aa20.66■□□□□ 0.9
TSPAN4-215ENST00000525334 PRRC2BQ5JSZ5 2229 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-215ENST00000525334 C9IYK1 514 aa20.65■□□□□ 0.9
TSPAN4-215ENST00000525334 CSDE1O75534 798 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-215ENST00000525334 BTG3Q14201 252 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-215ENST00000525334 EPC2Q52LR7 807 aa20.65■□□□□ 0.9
TSPAN4-215ENST00000525334 CATSPER3Q86XQ3 398 aa20.65■□□□□ 0.9
TSPAN4-215ENST00000525334 TUFT1Q9NNX1 390 aa20.65■□□□□ 0.9
TSPAN4-215ENST00000525334 ANKEF1Q9NU02 776 aa20.65■□□□□ 0.9
TSPAN4-215ENST00000525334 COL4A3BPQ9Y5P4 624 aa20.65■□□□□ 0.9
TSPAN4-215ENST00000525334 RALGAPA2Q2PPJ7 1873 aa20.64■□□□□ 0.9
TSPAN4-215ENST00000525334 GAS2O43903 313 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 MED24O75448 989 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 LINC00271P0C7V0 271 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 RARRES1P49788 294 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 GATMP50440 423 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 PTGDRQ13258 359 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 LARP1BQ659C4 914 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 TMEM192Q8IY95 271 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 PIGOQ8TEQ8 1089 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 PRPF31Q8WWY3 499 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 PSPC1Q8WXF1 523 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 CCDC43Q96MW1 224 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 MTRQ99707 1265 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 COL25A1Q9BXS0 654 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 XPNPEP1Q9NQW7 623 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 LMCD1Q9NZU5 365 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 PCDHB7Q9Y5E2 793 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 VCANP13611 3396 aa20.64■□□□□ 0.89
TSPAN4-215ENST00000525334 A0A087WWV3 80 aa20.63■□□□□ 0.89
TSPAN4-215ENST00000525334 ZSCAN20P17040 1043 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-215ENST00000525334 FXR2P51116 673 aaKnown RBP eCLIP20.63■□□□□ 0.89
TSPAN4-215ENST00000525334 RILPL1Q5EBL4 403 aa20.63■□□□□ 0.89
TSPAN4-215ENST00000525334 CMTR2Q8IYT2 770 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-215ENST00000525334 ERMNQ8TAM6 284 aa20.63■□□□□ 0.89
TSPAN4-215ENST00000525334 TCP11Q8WWU5 503 aa20.63■□□□□ 0.89
TSPAN4-215ENST00000525334 POLR3CQ9BUI4 534 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-215ENST00000525334 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-215ENST00000525334 REV3LO60673 3130 aa20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 SFPQP23246 707 aaKnown RBP eCLIP20.62■□□□□ 0.892e-6■■■■□ 23.9
TSPAN4-215ENST00000525334 CTNNB1P35222 781 aa20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 FAM189BP81408 668 aa20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 LAMTOR4Q0VGL1 99 aa20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 PAN2Q504Q3 1202 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 POTEGQ6S5H5 508 aa20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 FERMT3Q86UX7 667 aa20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 ATXN2LQ8WWM7 1075 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-215ENST00000525334 CLP1Q92989 425 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms