RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TET3O43151 1660 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 SPHKAPQ2M3C7 1700 aa4.34□□□□□ -1.71
CSDE1-208ENST00000524652 ABCC3O15438 1527 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 PZPP20742 1482 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 CCDC66A2RUB6 948 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 PRAMEF25A6NGN4 478 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 CCDC85CA6NKD9 419 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 E9PSI1 815 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 DIAPH1O60610 1272 aaKnown RBP4.33□□□□□ -1.72
CSDE1-208ENST00000524652 EFCAB14O75071 495 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 RAD17O75943 681 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 CRTAMO95727 393 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 C4BPAP04003 597 aaKnown RBP4.33□□□□□ -1.72
CSDE1-208ENST00000524652 HMGCRP04035 888 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 ATP2B1P20020 1258 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 CR2P20023 1033 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 JAM2P57087 298 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 LACTBP83111 547 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-208ENST00000524652 NFYCQ13952 458 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 RASA3Q14644 834 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 RNF151Q2KHN1 245 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 WDR72Q3MJ13 1102 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 LRP10Q7Z4F1 713 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 ZC3H7AQ8IWR0 971 aaKnown RBP4.33□□□□□ -1.72
CSDE1-208ENST00000524652 FUKQ8N0W3 1084 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 ARMC5Q96C12 935 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 ADOQ96SZ5 270 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 HIRIP3Q9BW71 556 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-208ENST00000524652 BTBD2Q9BX70 525 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 TANGO6Q9C0B7 1094 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 SMURF1Q9HCE7 757 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 BTBD7Q9P203 1132 aa4.33□□□□□ -1.72
CSDE1-208ENST00000524652 MRPS23Q9Y3D9 190 aaKnown RBP4.33□□□□□ -1.72
CSDE1-208ENST00000524652 SYNMO15061 1565 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 EFCAB6Q5THR3 1501 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 LMTK2Q8IWU2 1503 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 FAM135AQ9P2D6 1515 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 SETD5Q9C0A6 1442 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 RAB3GAP2Q9H2M9 1393 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 AMHP03971 560 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 SLPIP03973 132 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 APPP05067 770 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 FAM153BP0C7A2 387 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 SRGAP2CP0DJJ0 459 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 KRT15P19012 456 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 RRADP55042 308 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 SERINC3Q13530 473 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 EIF4HQ15056 248 aaKnown RBP4.32□□□□□ -1.72
CSDE1-208ENST00000524652 POLNQ7Z5Q5 900 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 PPP1R1BQ9UD71 204 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-208ENST00000524652 NR2E1Q9Y466 385 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 PCDHA9Q9Y5H5 950 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 SETD1BQ9UPS6 1966 aaKnown RBP4.32□□□□□ -1.72
CSDE1-208ENST00000524652 PIK3C2BO00750 1634 aa4.32□□□□□ -1.72
CSDE1-208ENST00000524652 KDM2BQ8NHM5 1336 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 KIF3BO15066 747 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 ARHGAP6O43182 974 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 CDC14BO60729 498 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 MC4RP32245 332 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 HMGA2P52926 109 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 DUSP8Q13202 625 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 TRIM61Q5EBN2 209 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 MIIPQ5JXC2 388 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 KANK2Q63ZY3 851 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 TMEM200BQ69YZ2 307 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 RNF207Q6ZRF8 634 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 NOSTRINQ8IVI9 506 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 GSTCDQ8NEC7 633 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 C8orf37Q96NL8 207 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 CELF4Q9BZC1 486 aaKnown RBP4.31□□□□□ -1.72
CSDE1-208ENST00000524652 PCED1AQ9H1Q7 454 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 OR10A5Q9H207 317 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 SLC52A2Q9HAB3 445 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 ZNF142P52746 1687 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-208ENST00000524652 MYO3AQ8NEV4 1616 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 UGGT1Q9NYU2 1555 aa4.31□□□□□ -1.72
CSDE1-208ENST00000524652 PTPRMP28827 1452 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 KIF1BO60333 1816 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 UBR1Q8IWV7 1749 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 IFT172Q9UG01 1749 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 A0A0G2JNJ9 132 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-208ENST00000524652 MATN2O00339 956 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 SUV39H1O43463 412 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 MAFO75444 373 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-208ENST00000524652 MPIG6BO95866 241 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 RPS19P39019 145 aaKnown RBP4.3□□□□□ -1.72
CSDE1-208ENST00000524652 ADCY8P40145 1251 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 ECE1P42892 770 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 DNM2P50570 870 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 KCNQ1P51787 676 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 AGBL4Q5VU57 503 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 TRIM68Q6AZZ1 485 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 GGT6Q6P531 493 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 USP30Q70CQ3 517 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 OTOP2Q7RTS6 562 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 ZFPM1Q8IX07 1006 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 WDR48Q8TAF3 677 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 DEPDC7Q96QD5 511 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 DPYSL5Q9BPU6 564 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms