RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 GRXCR1A8MXD5 290 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 ENPP3O14638 875 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 GJB5O95377 273 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 UBA7P41226 1012 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 POU5F1BQ06416 359 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 NFX1Q12986 1120 aaKnown RBP11.26□□□□□ -0.61
TTC39A-213ENST00000524442 DRP2Q13474 957 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 SLC39A14Q15043 492 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 PCBP1Q15365 356 aaKnown RBP eCLIP11.26□□□□□ -0.61
TTC39A-213ENST00000524442 ZNF697Q5TEC3 545 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 PRPF31Q8WWY3 499 aaKnown RBP11.26□□□□□ -0.61
TTC39A-213ENST00000524442 TOP1MTQ969P6 601 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 TMEM143Q96AN5 459 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 TIFAQ96CG3 184 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 RAD9AQ99638 391 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 TSPYL2Q9H2G4 693 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-213ENST00000524442 XPNPEP1Q9NQW7 623 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 C1orf112Q9NSG2 853 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 DDX19AQ9NUU7 478 aaKnown RBP11.26□□□□□ -0.61
TTC39A-213ENST00000524442 ST3GAL5Q9UNP4 418 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 CLIC4Q9Y696 253 aa11.26□□□□□ -0.61
TTC39A-213ENST00000524442 PP2D1A8MPX8 630 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 EYA4O95677 639 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 F13A1P00488 732 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 CYP11B2P19099 503 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 SFPQP23246 707 aaKnown RBP eCLIP11.25□□□□□ -0.61
TTC39A-213ENST00000524442 CDC25AP30304 524 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 ARL2P36404 184 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 NASPP49321 788 aaPredicted RBP11.25□□□□□ -0.61
TTC39A-213ENST00000524442 DEFB103AP81534 67 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 LAMTOR4Q0VGL1 99 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 TFDP1Q14186 410 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 ECM1Q16610 540 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 FAM173BQ6P4H8 233 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 PADI6Q6TGC4 694 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.25□□□□□ -0.61
TTC39A-213ENST00000524442 SRGAP1Q7Z6B7 1085 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 CABP7Q86V35 215 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 FAM228AQ86W67 206 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 MYOCDQ8IZQ8 938 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 CALML4Q96GE6 196 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 CDK5RAP3Q96JB5 506 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 USP28Q96RU2 1077 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 PPP1R16BQ96T49 567 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 MMTAG2Q9BU76 263 aaKnown RBP11.25□□□□□ -0.61
TTC39A-213ENST00000524442 BHMT2Q9H2M3 363 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 SLC28A3Q9HAS3 691 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 CHST12Q9NRB3 414 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 INSL6Q9Y581 213 aa11.25□□□□□ -0.61
TTC39A-213ENST00000524442 SRPRBQ9Y5M8 271 aaKnown RBP11.25□□□□□ -0.61
TTC39A-213ENST00000524442 A0A087WZ62 844 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 DENND3A2RUS2 1198 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 TLL1O43897 1013 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 USO1O60763 962 aaKnown RBP11.24□□□□□ -0.61
TTC39A-213ENST00000524442 STAG3L1P0CL83 205 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 ZSCAN20P17040 1043 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-213ENST00000524442 PBX2P40425 430 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 PHKA2P46019 1235 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-213ENST00000524442 DEFB123Q8N688 67 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 NLRP4Q96MN2 994 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 FDXACB1Q9BRP7 624 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-213ENST00000524442 TIPINQ9BVW5 301 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 NFKBIZQ9BYH8 718 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 CCSER1Q9C0I3 900 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 TMX1Q9H3N1 280 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 IFT122Q9HBG6 1241 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 RGS18Q9NS28 235 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 DACT1Q9NYF0 836 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 KCND2Q9NZV8 630 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-213ENST00000524442 FBXO2Q9UK22 296 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-213ENST00000524442 EVPLQ92817 2033 aa11.24□□□□□ -0.61
TTC39A-213ENST00000524442 SIP14410 1827 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 A0A087WWV3 80 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 PPP6R2O75170 966 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 YEATS4O95619 227 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 BRD1O95696 1058 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 SRGAP2CP0DJJ0 459 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 MARCKSP29966 332 aaPredicted RBP11.23□□□□□ -0.61
TTC39A-213ENST00000524442 SARSP49591 514 aaKnown RBP11.23□□□□□ -0.61
TTC39A-213ENST00000524442 RABGGTBP53611 331 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 PTENP60484 403 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 FAM189BP81408 668 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 HTRA4P83105 476 aaPredicted RBP11.23□□□□□ -0.61
TTC39A-213ENST00000524442 CEBPZQ03701 1054 aaKnown RBP11.23□□□□□ -0.61
TTC39A-213ENST00000524442 DSC3Q14574 896 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 PPP2R5AQ15172 486 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 STK38Q15208 465 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 TMEM119Q4V9L6 283 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 SLC24A5Q71RS6 500 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 RTN4RL1Q86UN2 441 aaPredicted RBP11.23□□□□□ -0.61
TTC39A-213ENST00000524442 NPAS4Q8IUM7 802 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 KSR1Q8IVT5 923 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 KRI1Q8N9T8 703 aaKnown RBP11.23□□□□□ -0.61
TTC39A-213ENST00000524442 RNF149Q8NC42 400 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 LINC00301Q8NCQ3 95 aa11.23□□□□□ -0.61
TTC39A-213ENST00000524442 LINC01599Q8WXQ3 324 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms