RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 ST3GAL5Q9UNP4 418 aa11.12□□□□□ -0.63
LAMA4-220ENST00000523765 GINS2Q9Y248 185 aa11.12□□□□□ -0.63
LAMA4-220ENST00000523765 PCDHA2Q9Y5H9 948 aa11.12□□□□□ -0.63
LAMA4-220ENST00000523765 KDM3AQ9Y4C1 1321 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 DENND3A2RUS2 1198 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 C2orf72A6NCS6 295 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 PALM3A6NDB9 673 aaPredicted RBP11.11□□□□□ -0.63
LAMA4-220ENST00000523765 ITGB5P18084 799 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 CA8P35219 290 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 DSC3Q14574 896 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 SMC1AQ14683 1233 aaKnown RBP11.11□□□□□ -0.63
LAMA4-220ENST00000523765 PCNX4Q63HM2 1172 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 FAM228AQ86W67 206 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 SLC22A17Q8WUG5 538 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 SEPT1Q8WYJ6 367 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 ZNF558Q96NG5 402 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 LNPKQ9C0E8 428 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 RIOX1Q9H6W3 641 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 PUF60Q9UHX1 559 aaKnown RBP11.11□□□□□ -0.63
LAMA4-220ENST00000523765 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
LAMA4-220ENST00000523765 M0QZ92 97 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 RPS6KA5O75582 802 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 STAM2O75886 525 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 CXCL14O95715 111 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 PCP11498 1178 aaKnown RBP11.1□□□□□ -0.63
LAMA4-220ENST00000523765 SEC23AQ15436 765 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 CLLU1OSQ5K130 101 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 ATAT1Q5SQI0 421 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 MTHFD1LQ6UB35 978 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 CYB5R4Q7L1T6 521 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 IQCA1Q86XH1 822 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 KIAA0319LQ8IZA0 1049 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 SLC39A11Q8N1S5 342 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 SAMD3Q8N6K7 520 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 BCL7CQ8WUZ0 217 aaPredicted RBP11.1□□□□□ -0.63
LAMA4-220ENST00000523765 EVI5LQ96CN4 794 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 TBC1D32Q96NH3 1257 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 SMARCAD1Q9H4L7 1026 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 TBC1D17Q9HA65 648 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 ATP6V0A4Q9HBG4 840 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 TMEM161AQ9NX61 479 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 SPG21Q9NZD8 308 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 CACNA1IQ9P0X4 2223 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 NBEAQ8NFP9 2946 aa11.1□□□□□ -0.63
LAMA4-220ENST00000523765 MIA3Q5JRA6 1907 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-220ENST00000523765 SMIM35A0A1B0GVV1 85 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 RRN3P2A6NIE6 340 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 MEIS2O14770 477 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 TGM1P22735 817 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 METAP2P50579 478 aaKnown RBP eCLIP11.09□□□□□ -0.63
LAMA4-220ENST00000523765 XRRA1Q6P2D8 792 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 C1orf210Q8IVY1 113 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 VN1R3Q9BXE9 311 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 FOXQ1Q9C009 403 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 TMEM117Q9H0C3 514 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 ZBP1Q9H171 429 aa11.09□□□□□ -0.63
LAMA4-220ENST00000523765 RNF41Q9H4P4 317 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-220ENST00000523765 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-220ENST00000523765 ZNF213O14771 459 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 ADRB1P08588 477 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 PLCB2Q00722 1185 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 KRT17Q04695 432 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 TBC1D8BQ0IIM8 1120 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 BECN1Q14457 450 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 WTAPQ15007 396 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 KIZQ2M2Z5 673 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 IFIT1BQ5T764 474 aaKnown RBP11.08□□□□□ -0.64
LAMA4-220ENST00000523765 GPR149Q86SP6 731 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 VPS52Q8N1B4 723 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 GPR152Q8TDT2 470 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 OSMRQ99650 979 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 PARD6AQ9NPB6 346 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 C1orf112Q9NSG2 853 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 WNT16Q9UBV4 365 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 DOCK8Q8NF50 2099 aa11.08□□□□□ -0.64
LAMA4-220ENST00000523765 MYH15Q9Y2K3 1946 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 LAMA1P25391 3075 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 PNMA6FA0A0J9YX94 578 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 ZBTB42B2RXF5 422 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 MYBP10242 640 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 KLRC1P26715 233 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 GRM4Q14833 912 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 VARS2Q5ST30 1063 aaKnown RBP11.07□□□□□ -0.64
LAMA4-220ENST00000523765 CCDC149Q6ZUS6 474 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 OTOP3Q7RTS5 596 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 NLRX1Q86UT6 975 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 SPNS2Q8IVW8 549 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 ZNF710Q8N1W2 664 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 LRRC43Q8N309 656 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 SLC44A3Q8N4M1 653 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 RNF169Q8NCN4 708 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 GIMAP8Q8ND71 665 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-220ENST00000523765 HELQQ8TDG4 1101 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 ACSF2Q96CM8 615 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-220ENST00000523765 GPRASP2Q96D09 838 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 ZNF668Q96K58 619 aaPredicted RBP11.07□□□□□ -0.64
LAMA4-220ENST00000523765 MYADMQ96S97 322 aa11.07□□□□□ -0.64
LAMA4-220ENST00000523765 ELAC1Q9H777 363 aaKnown RBP11.07□□□□□ -0.64
LAMA4-220ENST00000523765 DZANK1Q9NVP4 752 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms