RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 KLF1Q13351 362 aaPredicted RBP6.65□□□□□ -1.34
SKP1-211ENST00000523359 CT83Q5H943 113 aa6.65□□□□□ -1.34
SKP1-211ENST00000523359 ZFYVE27Q5T4F4 411 aa6.65□□□□□ -1.34
SKP1-211ENST00000523359 DBX2Q6ZNG2 339 aa6.65□□□□□ -1.34
SKP1-211ENST00000523359 CBARPQ8N350 705 aaPredicted RBP6.65□□□□□ -1.34
SKP1-211ENST00000523359 WDR48Q8TAF3 677 aa6.65□□□□□ -1.34
SKP1-211ENST00000523359 TGFBRAP1Q8WUH2 860 aa6.65□□□□□ -1.34
SKP1-211ENST00000523359 FERMT2Q96AC1 680 aa6.65□□□□□ -1.34
SKP1-211ENST00000523359 OR10A5Q9H207 317 aa6.65□□□□□ -1.34
SKP1-211ENST00000523359 SPATA6Q9NWH7 488 aaPredicted RBP6.65□□□□□ -1.34
SKP1-211ENST00000523359 PRSS38A1L453 326 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 ALDH1L1O75891 902 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 S100BP04271 92 aaPredicted RBP6.64□□□□□ -1.35
SKP1-211ENST00000523359 MYBL2P10244 700 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 APEX1P27695 318 aaKnown RBP6.64□□□□□ -1.35
SKP1-211ENST00000523359 MLLT6P55198 1093 aaPredicted RBP6.64□□□□□ -1.35
SKP1-211ENST00000523359 CD83Q01151 205 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 NOLC1Q14978 699 aaKnown RBP eCLIP6.64□□□□□ -1.35
SKP1-211ENST00000523359 STILQ15468 1287 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 INAVAQ3KP66 663 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 ODR4Q5SWX8 454 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 KANK2Q63ZY3 851 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 KIAA1841Q6NSI8 718 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 CCDC62Q6P9F0 684 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 DPP8Q6V1X1 898 aaPredicted RBP6.64□□□□□ -1.35
SKP1-211ENST00000523359 KANSL1Q7Z3B3 1105 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 GGNQ86UU5 652 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 ZCCHC14Q8WYQ9 949 aaKnown RBP6.64□□□□□ -1.35
SKP1-211ENST00000523359 ACAP3Q96P50 834 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 NTMQ9P121 344 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 KCNG1Q9UIX4 513 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 DUSP10Q9Y6W6 482 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 TNKSO95271 1327 aa6.64□□□□□ -1.35
SKP1-211ENST00000523359 NOBOXO60393 691 aa6.63□□□□□ -1.35
SKP1-211ENST00000523359 H2AFYO75367 372 aaKnown RBP6.63□□□□□ -1.35
SKP1-211ENST00000523359 CNR2P34972 360 aa6.63□□□□□ -1.35
SKP1-211ENST00000523359 GPR3P46089 330 aa6.63□□□□□ -1.35
SKP1-211ENST00000523359 SARSP49591 514 aaKnown RBP6.63□□□□□ -1.35
SKP1-211ENST00000523359 EFEMP1Q12805 493 aa6.63□□□□□ -1.35
SKP1-211ENST00000523359 MOGSQ13724 837 aa6.63□□□□□ -1.35
SKP1-211ENST00000523359 RGL3Q3MIN7 710 aa6.63□□□□□ -1.35
SKP1-211ENST00000523359 WDR72Q3MJ13 1102 aa6.63□□□□□ -1.35
SKP1-211ENST00000523359 PRR31Q5SQ13 230 aa6.63□□□□□ -1.35
SKP1-211ENST00000523359 TRMT10BQ6PF06 316 aaKnown RBP6.63□□□□□ -1.35
SKP1-211ENST00000523359 C1orf162Q8NEQ5 155 aaPredicted RBP6.63□□□□□ -1.35
SKP1-211ENST00000523359 RPGRQ92834 1020 aaKnown RBP6.63□□□□□ -1.35
SKP1-211ENST00000523359 KLHL42Q9P2K6 505 aa6.63□□□□□ -1.35
SKP1-211ENST00000523359 ST20-MTHFSA0A0A6YYL1 179 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 CYP7B1O75881 506 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 KNG1P01042 644 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 LPLP06858 475 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 COL6A1P12109 1028 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 IL13P35225 146 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 ADCY8P40145 1251 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 NEK2P51955 445 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 GJA9P57773 515 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 TTF1Q15361 905 aaPredicted RBP6.62□□□□□ -1.35
SKP1-211ENST00000523359 SPATS1Q496A3 300 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 PGM2L1Q6PCE3 622 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 EAF2Q96CJ1 260 aaPredicted RBP6.62□□□□□ -1.35
SKP1-211ENST00000523359 FUBP3Q96I24 572 aaKnown RBP eCLIP6.62□□□□□ -1.35
SKP1-211ENST00000523359 QRSL1Q9H0R6 528 aaKnown RBP6.62□□□□□ -1.35
SKP1-211ENST00000523359 G3BP2Q9UN86 482 aaKnown RBP6.62□□□□□ -1.35
SKP1-211ENST00000523359 EDARQ9UNE0 448 aa6.62□□□□□ -1.35
SKP1-211ENST00000523359 THRAP3Q9Y2W1 955 aaKnown RBP6.62□□□□□ -1.35
SKP1-211ENST00000523359 MYPNQ86TC9 1320 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 SHTN1A0MZ66 631 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 H0Y858 1186 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 K7ESM1 405 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 PCDH8O95206 1070 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 ZNF28P17035 718 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 ENPP1P22413 925 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 RPL13P26373 211 aaKnown RBP6.61□□□□□ -1.35
SKP1-211ENST00000523359 BCAR1P56945 870 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 NFATC3Q12968 1075 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 FSCN1Q16658 493 aaKnown RBP6.61□□□□□ -1.35
SKP1-211ENST00000523359 PTPN21Q16825 1174 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 UGT8Q16880 541 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 PITRM1Q5JRX3 1037 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 TTLL7Q6ZT98 887 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 ZNF761Q86XN6 746 aaPredicted RBP6.61□□□□□ -1.35
SKP1-211ENST00000523359 MTG2Q9H4K7 406 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 PRDM12Q9H4Q4 367 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 CCM2LQ9NUG4 571 aaPredicted RBP6.61□□□□□ -1.35
SKP1-211ENST00000523359 MAGEL2Q9UJ55 1249 aa6.61□□□□□ -1.35
SKP1-211ENST00000523359 DDX3XO00571 662 aaKnown RBP eCLIP6.6□□□□□ -1.35
SKP1-211ENST00000523359 PFKMP08237 780 aa6.6□□□□□ -1.35
SKP1-211ENST00000523359 MCL1Q07820 350 aa6.6□□□□□ -1.35
SKP1-211ENST00000523359 PCBP2Q15366 365 aaKnown RBP eCLIP6.6□□□□□ -1.35
SKP1-211ENST00000523359 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.6□□□□□ -1.35
SKP1-211ENST00000523359 TOR2AQ5JU69 321 aa6.6□□□□□ -1.35
SKP1-211ENST00000523359 GRAMD4Q6IC98 578 aa6.6□□□□□ -1.35
SKP1-211ENST00000523359 CXXC5Q7LFL8 322 aaKnown RBP6.6□□□□□ -1.35
SKP1-211ENST00000523359 ZBTB46Q86UZ6 589 aa6.6□□□□□ -1.35
SKP1-211ENST00000523359 RAVER1Q8IY67 606 aaKnown RBP6.6□□□□□ -1.35
SKP1-211ENST00000523359 JDP2Q8WYK2 163 aa6.6□□□□□ -1.35
SKP1-211ENST00000523359 FAXDC2Q96IV6 333 aa6.6□□□□□ -1.35
SKP1-211ENST00000523359 ORAI2Q96SN7 254 aa6.6□□□□□ -1.35
SKP1-211ENST00000523359 METTL14Q9HCE5 456 aaKnown RBP6.6□□□□□ -1.35
SKP1-211ENST00000523359 MKS1Q9NXB0 559 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms