RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 E2F7Q96AV8 911 aa5.86□□□□□ -1.47
CLK4-213ENST00000523013 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
CLK4-213ENST00000523013 SAE1Q9UBE0 346 aaPredicted RBP5.86□□□□□ -1.47
CLK4-213ENST00000523013 UBA6A0AVT1 1052 aaPredicted RBP5.85□□□□□ -1.47
CLK4-213ENST00000523013 CBX4O00257 560 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 ZNF202O95125 648 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 PTX3P26022 381 aaPredicted RBP5.85□□□□□ -1.47
CLK4-213ENST00000523013 SESN2P58004 480 aaPredicted RBP5.85□□□□□ -1.47
CLK4-213ENST00000523013 CREB3L3Q68CJ9 461 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 SLFN12LQ6IEE8 588 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 D2HGDHQ8N465 521 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 KIAA1958Q8N8K9 716 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 CSRNP2Q9H175 543 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 SLC6A15Q9H2J7 730 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 CABP5Q9NP86 173 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 B4GALT6Q9UBX8 382 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 DENND2AQ9ULE3 1009 aa5.85□□□□□ -1.47
CLK4-213ENST00000523013 H2AFYO75367 372 aaKnown RBP5.84□□□□□ -1.47
CLK4-213ENST00000523013 CYP17A1P05093 508 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 EPHA7Q15375 998 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 DGKDQ16760 1214 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 LSM12Q3MHD2 195 aaKnown RBP5.84□□□□□ -1.47
CLK4-213ENST00000523013 TTC38Q5R3I4 469 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 PIK3R6Q5UE93 754 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 SGMS1Q86VZ5 419 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 GFM2Q969S9 779 aaKnown RBP5.84□□□□□ -1.47
CLK4-213ENST00000523013 SLC7A6OSQ96CW6 309 aaPredicted RBP5.84□□□□□ -1.47
CLK4-213ENST00000523013 GPHA2Q96T91 129 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 HAPLN2Q9GZV7 340 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 PCIF1Q9H4Z3 704 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 ZNF703Q9H7S9 590 aaPredicted RBP5.84□□□□□ -1.47
CLK4-213ENST00000523013 TMEM260Q9NX78 707 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 KCMF1Q9P0J7 381 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 SH3BP1Q9Y3L3 701 aa5.84□□□□□ -1.47
CLK4-213ENST00000523013 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 H7C1D1 291 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 RFPL3O75679 317 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 JMJD7P0C870 316 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 HHEXQ03014 270 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 MYBPC3Q14896 1274 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 CDCA2Q69YH5 1023 aaPredicted RBP5.83□□□□□ -1.48
CLK4-213ENST00000523013 ESRP1Q6NXG1 681 aaKnown RBP5.83□□□□□ -1.48
CLK4-213ENST00000523013 MRFAP1L1Q96HT8 127 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 PLEKHG4BQ96PX9 1271 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 MPHOSPH9Q99550 1183 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 CEP72Q9P209 647 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 GIT1Q9Y2X7 761 aa5.83□□□□□ -1.48
CLK4-213ENST00000523013 RBM8AQ9Y5S9 174 aaKnown RBP5.83□□□□□ -1.48
CLK4-213ENST00000523013 A0A1W2PRX2 142 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 CAPN14A8MX76 684 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 SLC9A1P19634 815 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 ABHD18Q0P651 414 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 PABPC4Q13310 644 aaKnown RBP eCLIP5.82□□□□□ -1.48
CLK4-213ENST00000523013 FHL2Q14192 279 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 ZNF174Q15697 407 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 FNDC7Q5VTL7 733 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 PRAMEF9Q5VWM5 478 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 CLEC14AQ86T13 490 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 ANKRD53Q8N9V6 530 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 GCDHQ92947 438 aaPredicted RBP5.82□□□□□ -1.48
CLK4-213ENST00000523013 RPL10LQ96L21 214 aaKnown RBP5.82□□□□□ -1.48
CLK4-213ENST00000523013 TUBGCP5Q96RT8 1024 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 ELF4Q99607 663 aaPredicted RBP5.82□□□□□ -1.48
CLK4-213ENST00000523013 ZSWIM4Q9H7M6 989 aa5.82□□□□□ -1.48
CLK4-213ENST00000523013 AURKAIP1Q9NWT8 199 aaPredicted RBP5.82□□□□□ -1.48
CLK4-213ENST00000523013 ASMTLO95671 621 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 RANGAP1P46060 587 aaPredicted RBP5.81□□□□□ -1.48
CLK4-213ENST00000523013 BPIFB4P59827 614 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 TCIRG1Q13488 830 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 UBE2R2Q712K3 238 aaPredicted RBP5.81□□□□□ -1.48
CLK4-213ENST00000523013 KANSL1Q7Z3B3 1105 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 BMP8AQ7Z5Y6 402 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 NME9Q86XW9 330 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 TMPRSS6Q8IU80 811 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 THEMISQ8N1K5 641 aaPredicted RBP5.81□□□□□ -1.48
CLK4-213ENST00000523013 DYDC2Q96IM9 177 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 ORAI3Q9BRQ5 295 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 MENTQ9BUN1 341 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 SLITRK6Q9H5Y7 841 aa5.81□□□□□ -1.48
CLK4-213ENST00000523013 POLR3BQ9NW08 1133 aaPredicted RBP5.81□□□□□ -1.48
CLK4-213ENST00000523013 FAM83GA6ND36 823 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 CYP27B1O15528 508 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 FLT3P36888 993 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 BCAR1P56945 870 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 TUBA3CQ13748 450 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 RRP1BQ14684 758 aaKnown RBP5.8□□□□□ -1.48
CLK4-213ENST00000523013 CCDC144BQ3MJ40 725 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 CFAP100Q494V2 611 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 TUBA3EQ6PEY2 450 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 GAREM2Q75VX8 874 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 AMER2Q8N7J2 671 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 PLA2G15Q8NCC3 412 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 WDR92Q96MX6 357 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 PITHD1Q9GZP4 211 aaPredicted RBP5.8□□□□□ -1.48
CLK4-213ENST00000523013 INTS7Q9NVH2 962 aaKnown RBP5.8□□□□□ -1.48
CLK4-213ENST00000523013 OXSMQ9NWU1 459 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 H2AFY2Q9P0M6 372 aaPredicted RBP5.8□□□□□ -1.48
CLK4-213ENST00000523013 DNAI1Q9UI46 699 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 SPO11Q9Y5K1 396 aa5.8□□□□□ -1.48
CLK4-213ENST00000523013 ATP2A2P16615 1042 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms