RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 FXR2P51116 673 aaKnown RBP eCLIP19.95■□□□□ 0.78
CLK4-211ENST00000522556 POLGP54098 1239 aaPredicted RBP19.95■□□□□ 0.78
CLK4-211ENST00000522556 FAM173BQ6P4H8 233 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 RHPN2Q8IUC4 686 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 USP38Q8NB14 1042 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 INTS4Q96HW7 963 aaKnown RBP19.95■□□□□ 0.78
CLK4-211ENST00000522556 SCLT1Q96NL6 688 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 RAD9AQ99638 391 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 FDXACB1Q9BRP7 624 aaPredicted RBP19.95■□□□□ 0.78
CLK4-211ENST00000522556 MTUS1Q9ULD2 1270 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 STXBP5LQ9Y2K9 1186 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 MYH15Q9Y2K3 1946 aa19.94■□□□□ 0.78
CLK4-211ENST00000522556 DARSP14868 501 aaKnown RBP19.94■□□□□ 0.78
CLK4-211ENST00000522556 RARRES1P49788 294 aa19.94■□□□□ 0.78
CLK4-211ENST00000522556 ATP2C1P98194 919 aaPredicted RBP19.94■□□□□ 0.78
CLK4-211ENST00000522556 RESTQ13127 1097 aa19.94■□□□□ 0.78
CLK4-211ENST00000522556 RILPL1Q5EBL4 403 aa19.94■□□□□ 0.78
CLK4-211ENST00000522556 CRIPAKQ8N1N5 446 aa19.94■□□□□ 0.78
CLK4-211ENST00000522556 NLRP7Q8WX94 980 aa19.94■□□□□ 0.78
CLK4-211ENST00000522556 NLRP4Q96MN2 994 aa19.94■□□□□ 0.78
CLK4-211ENST00000522556 TSPYL2Q9H2G4 693 aaPredicted RBP19.94■□□□□ 0.78
CLK4-211ENST00000522556 RC3H2Q9HBD1 1191 aaKnown RBP19.94■□□□□ 0.78
CLK4-211ENST00000522556 EIF4BP23588 611 aaKnown RBP19.93■□□□□ 0.78
CLK4-211ENST00000522556 DSC3Q14574 896 aa19.93■□□□□ 0.78
CLK4-211ENST00000522556 IGSF22Q8N9C0 903 aa19.93■□□□□ 0.78
CLK4-211ENST00000522556 SLC7A3Q8WY07 619 aa19.93■□□□□ 0.78
CLK4-211ENST00000522556 ARNTL2Q8WYA1 636 aa19.93■□□□□ 0.78
CLK4-211ENST00000522556 ADAM2Q99965 735 aa19.93■□□□□ 0.78
CLK4-211ENST00000522556 MMTAG2Q9BU76 263 aaKnown RBP19.93■□□□□ 0.78
CLK4-211ENST00000522556 POLR3CQ9BUI4 534 aaPredicted RBP19.93■□□□□ 0.78
CLK4-211ENST00000522556 TUFT1Q9NNX1 390 aa19.93■□□□□ 0.78
CLK4-211ENST00000522556 ANKEF1Q9NU02 776 aa19.93■□□□□ 0.78
CLK4-211ENST00000522556 MTMR6Q9Y217 621 aa19.93■□□□□ 0.78
CLK4-211ENST00000522556 FNDC1Q4ZHG4 1894 aaPredicted RBP19.92■□□□□ 0.78
CLK4-211ENST00000522556 USO1O60763 962 aaKnown RBP19.92■□□□□ 0.78
CLK4-211ENST00000522556 FOSL2P15408 326 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 RPA1P27694 616 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 CCT6AP40227 531 aaKnown RBP19.92■□□□□ 0.78
CLK4-211ENST00000522556 RFC5P40937 340 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 OTUD6AQ7L8S5 288 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 HSCBQ8IWL3 235 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 SP7Q8TDD2 431 aaPredicted RBP19.92■□□□□ 0.78
CLK4-211ENST00000522556 ASAP3Q8TDY4 903 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 PRPF31Q8WWY3 499 aaKnown RBP19.92■□□□□ 0.78
CLK4-211ENST00000522556 YME1L1Q96TA2 773 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 C17orf80Q9BSJ5 609 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 IFT122Q9HBG6 1241 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 GPRC5CQ9NQ84 441 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 LRWD1Q9UFC0 647 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 COL4A3BPQ9Y5P4 624 aa19.92■□□□□ 0.78
CLK4-211ENST00000522556 LINC00271P0C7V0 271 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 PRPHP41219 470 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 GRIN1Q05586 938 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 MAEAQ7L5Y9 396 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 SPRYD3Q8NCJ5 442 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 SNX29Q8TEQ0 813 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 GDPD5Q8WTR4 605 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 MTRQ99707 1265 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 FTHL17Q9BXU8 183 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 MINDY3Q9H8M7 445 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 INSL6Q9Y581 213 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 ATG2AQ2TAZ0 1938 aa19.91■□□□□ 0.78
CLK4-211ENST00000522556 RALGAPA2Q2PPJ7 1873 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 VWA3AA6NCI4 1184 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 C9IYK1 514 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 GPR182O15218 404 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 DNM2P50570 870 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 LAMTOR4Q0VGL1 99 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 KCNK18Q7Z418 384 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 ERMNQ8TAM6 284 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 PSPC1Q8WXF1 523 aaKnown RBP19.9■□□□□ 0.78
CLK4-211ENST00000522556 ATP6V0A4Q9HBG4 840 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 POLD4Q9HCU8 107 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 HCSTQ9UBK5 93 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 PPME1Q9Y570 386 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 CLIC4Q9Y696 253 aa19.9■□□□□ 0.78
CLK4-211ENST00000522556 DENND3A2RUS2 1198 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 LPXNO60711 386 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 DGKIO75912 1065 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 SRGAP2CP0DJJ0 459 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 PDCP20941 246 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 SF3A1Q15459 793 aaKnown RBP19.89■□□□□ 0.77
CLK4-211ENST00000522556 PAN2Q504Q3 1202 aaKnown RBP19.89■□□□□ 0.77
CLK4-211ENST00000522556 DTHD1Q6ZMT9 781 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 BRAPQ7Z569 592 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 ZNF410Q86VK4 478 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 NPAS4Q8IUM7 802 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 ADGRA3Q8IWK6 1321 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 ZNF689Q96CS4 500 aaPredicted RBP19.89■□□□□ 0.77
CLK4-211ENST00000522556 JPH2Q9BR39 696 aaPredicted RBP19.89■□□□□ 0.77
CLK4-211ENST00000522556 GCOM2Q9BZD3 368 aaPredicted RBP19.89■□□□□ 0.77
CLK4-211ENST00000522556 RGS18Q9NS28 235 aa19.89■□□□□ 0.77
CLK4-211ENST00000522556 DDX19AQ9NUU7 478 aaKnown RBP19.89■□□□□ 0.77
CLK4-211ENST00000522556 E9PMD0 336 aa19.88■□□□□ 0.77
CLK4-211ENST00000522556 LAD1O00515 517 aa19.88■□□□□ 0.77
CLK4-211ENST00000522556 DGAT1O75907 488 aa19.88■□□□□ 0.77
CLK4-211ENST00000522556 ARL2P36404 184 aa19.88■□□□□ 0.77
CLK4-211ENST00000522556 SARSP49591 514 aaKnown RBP19.88■□□□□ 0.77
CLK4-211ENST00000522556 ERVK-21P61565 698 aa19.88■□□□□ 0.77
CLK4-211ENST00000522556 CAPSQ13938 189 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms