RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 PNOCQ13519 176 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 CAMK4Q16566 473 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 KIAA0319LQ8IZA0 1049 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 TCP11Q8WWU5 503 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 HOOK1Q9UJC3 728 aaKnown RBP26.79■■□□□ 1.88
PVT1-212ENST00000521951 ODF2LQ9ULJ1 636 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 NOD1Q9Y239 953 aa26.79■■□□□ 1.88
PVT1-212ENST00000521951 ARL2P36404 184 aa26.78■■□□□ 1.88
PVT1-212ENST00000521951 LRRC26Q2I0M4 334 aa26.78■■□□□ 1.88
PVT1-212ENST00000521951 KLHL40Q2TBA0 621 aa26.78■■□□□ 1.88
PVT1-212ENST00000521951 TRIM60Q495X7 471 aa26.78■■□□□ 1.88
PVT1-212ENST00000521951 TAF2Q6P1X5 1199 aa26.78■■□□□ 1.88
PVT1-212ENST00000521951 ANKRD33Q7Z3H0 272 aa26.78■■□□□ 1.88
PVT1-212ENST00000521951 FAM49AQ9H0Q0 323 aaPredicted RBP26.78■■□□□ 1.88
PVT1-212ENST00000521951 POLR3FQ9H1D9 316 aaPredicted RBP26.78■■□□□ 1.88
PVT1-212ENST00000521951 SUCLA2Q9P2R7 463 aaPredicted RBP26.78■■□□□ 1.88
PVT1-212ENST00000521951 SFI1A8K8P3 1242 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 PQBP1O60828 265 aaKnown RBP26.77■■□□□ 1.88
PVT1-212ENST00000521951 CD4P01730 458 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 RTP1P59025 263 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 ASIC1P78348 528 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 TLE2Q04725 743 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 DPYDQ12882 1025 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 PTK7Q13308 1070 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 DNAJB3Q8WWF6 145 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 KIFAP3Q92845 792 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 TOX2Q96NM4 488 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 NUP62CLQ9H1M0 184 aa26.77■■□□□ 1.88
PVT1-212ENST00000521951 IDEP14735 1019 aa26.76■■□□□ 1.87
PVT1-212ENST00000521951 SKOR2Q2VWA4 1001 aaPredicted RBP26.76■■□□□ 1.87
PVT1-212ENST00000521951 PRPF31Q8WWY3 499 aaKnown RBP26.76■■□□□ 1.87
PVT1-212ENST00000521951 ERCC4Q92889 916 aaPredicted RBP26.76■■□□□ 1.87
PVT1-212ENST00000521951 WNT8BQ93098 351 aa26.76■■□□□ 1.87
PVT1-212ENST00000521951 DRC1Q96MC2 740 aa26.76■■□□□ 1.87
PVT1-212ENST00000521951 ATP11BQ9Y2G3 1177 aa26.76■■□□□ 1.87
PVT1-212ENST00000521951 TLR3O15455 904 aaKnown RBP26.75■■□□□ 1.87
PVT1-212ENST00000521951 TRAK2O60296 914 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 ASAP3Q8TDY4 903 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 PSPC1Q8WXF1 523 aaKnown RBP26.75■■□□□ 1.87
PVT1-212ENST00000521951 DHX38Q92620 1227 aaKnown RBP26.75■■□□□ 1.87
PVT1-212ENST00000521951 MAP7D2Q96T17 732 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 AKT3Q9Y243 479 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 DCDC2CA8MYV0 355 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 KLRC4O43908 158 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 TBCAO75347 108 aaKnown RBP26.75■■□□□ 1.87
PVT1-212ENST00000521951 FAM13AO94988 1023 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 VTNP04004 478 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 ZNF131P52739 623 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 ZHX3Q9H4I2 956 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 PANK4Q9NVE7 773 aa26.75■■□□□ 1.87
PVT1-212ENST00000521951 PVALEFA0A1B0GWK0 134 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 FRMD3A2A2Y4 597 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 GLRA2P23416 452 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 TRIM71Q2Q1W2 868 aaKnown RBP26.74■■□□□ 1.87
PVT1-212ENST00000521951 UNC13DQ70J99 1090 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 RHPN2Q8IUC4 686 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 KSR1Q8IVT5 923 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 CCDC65Q8IXS2 484 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 NME8Q8N427 588 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 BSNDQ8WZ55 320 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 PARVGQ9HBI0 331 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 TMEM63CQ9P1W3 806 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 PCDHA5Q9Y5H7 936 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 COL4A3BPQ9Y5P4 624 aa26.74■■□□□ 1.87
PVT1-212ENST00000521951 ASAP2O43150 1006 aa26.73■■□□□ 1.87
PVT1-212ENST00000521951 RPN1P04843 607 aaKnown RBP26.73■■□□□ 1.87
PVT1-212ENST00000521951 FAAP100Q0VG06 881 aa26.73■■□□□ 1.87
PVT1-212ENST00000521951 LAMTOR4Q0VGL1 99 aa26.73■■□□□ 1.87
PVT1-212ENST00000521951 MXD4Q14582 209 aaPredicted RBP26.73■■□□□ 1.87
PVT1-212ENST00000521951 RPAINQ86UA6 219 aa26.73■■□□□ 1.87
PVT1-212ENST00000521951 MYCT1Q8N699 235 aa26.73■■□□□ 1.87
PVT1-212ENST00000521951 PLS3P13797 630 aa26.72■■□□□ 1.87
PVT1-212ENST00000521951 TMEM62Q0P6H9 643 aa26.72■■□□□ 1.87
PVT1-212ENST00000521951 CCDC183Q5T5S1 534 aa26.72■■□□□ 1.87
PVT1-212ENST00000521951 CAVIN1Q6NZI2 390 aaKnown RBP26.72■■□□□ 1.87
PVT1-212ENST00000521951 RSPH3Q86UC2 560 aa26.72■■□□□ 1.87
PVT1-212ENST00000521951 SPATA20Q8TB22 786 aa26.72■■□□□ 1.87
PVT1-212ENST00000521951 IFT74Q96LB3 600 aa26.72■■□□□ 1.87
PVT1-212ENST00000521951 C17orf75Q9HAS0 396 aa26.72■■□□□ 1.87
PVT1-212ENST00000521951 SMC2O95347 1197 aa26.71■■□□□ 1.87
PVT1-212ENST00000521951 GAP43P17677 238 aa26.71■■□□□ 1.87
PVT1-212ENST00000521951 PEX3P56589 373 aa26.71■■□□□ 1.87
PVT1-212ENST00000521951 COASYQ13057 564 aa26.71■■□□□ 1.87
PVT1-212ENST00000521951 KMT5BQ4FZB7 885 aa26.71■■□□□ 1.87
PVT1-212ENST00000521951 HERC4Q5GLZ8 1057 aaPredicted RBP26.71■■□□□ 1.87
PVT1-212ENST00000521951 SFR1Q86XK3 245 aa26.71■■□□□ 1.87
PVT1-212ENST00000521951 SMARCE1Q969G3 411 aa26.71■■□□□ 1.87
PVT1-212ENST00000521951 ZNF668Q96K58 619 aaPredicted RBP26.71■■□□□ 1.87
PVT1-212ENST00000521951 PPP1R16BQ96T49 567 aa26.71■■□□□ 1.87
PVT1-212ENST00000521951 LARSQ9P2J5 1176 aaKnown RBP26.71■■□□□ 1.87
PVT1-212ENST00000521951 RPLP2P05387 115 aaKnown RBP26.7■■□□□ 1.87
PVT1-212ENST00000521951 THPOP40225 353 aa26.7■■□□□ 1.87
PVT1-212ENST00000521951 GPC3P51654 580 aa26.7■■□□□ 1.87
PVT1-212ENST00000521951 NLRP11P59045 1033 aaKnown RBP26.7■■□□□ 1.87
PVT1-212ENST00000521951 CAPSQ13938 189 aa26.7■■□□□ 1.87
PVT1-212ENST00000521951 ODR4Q5SWX8 454 aa26.7■■□□□ 1.87
PVT1-212ENST00000521951 KIAA1468Q9P260 1216 aa26.7■■□□□ 1.87
PVT1-212ENST00000521951 ALPK3Q96L96 1907 aa26.7■■□□□ 1.87
PVT1-212ENST00000521951 SRGAP2CP0DJJ0 459 aa26.7■■□□□ 1.86
PVT1-212ENST00000521951 NPTX2P47972 431 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms