RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 AGO3Q9H9G7 860 aaKnown RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 XPNPEP1Q9NQW7 623 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 NOC2LQ9Y3T9 749 aaKnown RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 SRPRBQ9Y5M8 271 aaKnown RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 PPP6R2O75170 966 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 RPS6KA5O75582 802 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 STAG3L1P0CL83 205 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 CYP11B2P19099 503 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 TFDP1Q14186 410 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 NAALADL2Q58DX5 795 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 XKR9Q5GH70 373 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 CDCA2Q69YH5 1023 aaPredicted RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 PPP4R3CPQ6ZMV5 832 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 FAM228AQ86W67 206 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 CMTR2Q8IYT2 770 aaKnown RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 FAM49AQ9H0Q0 323 aaPredicted RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 MTMR10Q9NXD2 777 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 COL4A3BPQ9Y5P4 624 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 EVPLQ92817 2033 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 COL4A4P53420 1690 aaPredicted RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 INPPL1O15357 1258 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 YEATS4O95619 227 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 CTSHP09668 335 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 GHRP10912 638 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 SFPQP23246 707 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLK4-209ENST00000521621 SLC39A14Q15043 492 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 LINC01599Q8WXQ3 324 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 ZNF396Q96N95 335 aaPredicted RBP10.54□□□□□ -0.72
CLK4-209ENST00000521621 IFT122Q9HBG6 1241 aa10.54□□□□□ -0.72
CLK4-209ENST00000521621 C9IYK1 514 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 C5orf67F2Z3F1 127 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 EOMESO95936 686 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 ZSCAN22P10073 491 aaPredicted RBP10.53□□□□□ -0.72
CLK4-209ENST00000521621 GUCY2CP25092 1073 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 RAB27AP51159 221 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 CLCN3P51790 818 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 NLRP11P59045 1033 aaKnown RBP10.53□□□□□ -0.72
CLK4-209ENST00000521621 ERVK-21P61565 698 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 SLC24A5Q71RS6 500 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 RTN4RL1Q86UN2 441 aaPredicted RBP10.53□□□□□ -0.72
CLK4-209ENST00000521621 METTL13Q8N6R0 699 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 TMEM40Q8WWA1 233 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 KIFAP3Q92845 792 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 LRCH3Q96II8 777 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 ST3GAL5Q9UNP4 418 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 AKT3Q9Y243 479 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 STXBP5LQ9Y2K9 1186 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 TET1Q8NFU7 2136 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 HOXA2O43364 376 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 ZNF623O75123 536 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 CD52P31358 61 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 ABCD1P33897 745 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 CCT6AP40227 531 aaKnown RBP10.53□□□□□ -0.72
CLK4-209ENST00000521621 PTENP60484 403 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 LAMTOR4Q0VGL1 99 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 NBR1Q14596 966 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 PLA2G4FQ68DD2 849 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 PRIMPOLQ96LW4 560 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 UIMC1Q96RL1 719 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 OSBPL7Q9BZF2 842 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 TTYH1Q9H313 450 aaPredicted RBP10.53□□□□□ -0.72
CLK4-209ENST00000521621 CDHR5Q9HBB8 845 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 DACT1Q9NYF0 836 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 FBXO2Q9UK22 296 aaPredicted RBP10.53□□□□□ -0.72
CLK4-209ENST00000521621 YBX2Q9Y2T7 364 aaKnown RBP10.53□□□□□ -0.72
CLK4-209ENST00000521621 NLRC5Q86WI3 1866 aa10.53□□□□□ -0.72
CLK4-209ENST00000521621 TTC3P53804 2025 aa10.52□□□□□ -0.72
CLK4-209ENST00000521621 DGKIO75912 1065 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 PHKA2P46019 1235 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 NPEPPSP55786 919 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 DEFB103AP81534 67 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 BECN1Q14457 450 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 PPP2R5AQ15172 486 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 SF3A1Q15459 793 aaKnown RBP10.52□□□□□ -0.73
CLK4-209ENST00000521621 SYT2Q8N9I0 419 aaPredicted RBP10.52□□□□□ -0.73
CLK4-209ENST00000521621 CNNM3Q8NE01 707 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 SNX29Q8TEQ0 813 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 PRPF31Q8WWY3 499 aaKnown RBP10.52□□□□□ -0.73
CLK4-209ENST00000521621 CLP1Q92989 425 aaKnown RBP10.52□□□□□ -0.73
CLK4-209ENST00000521621 C2orf40Q9H1Z8 148 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 TMEM161AQ9NX61 479 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 DNM3Q9UQ16 869 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 KIAA1671Q9BY89 1806 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 VPS37CA5D8V6 355 aaPredicted RBP10.52□□□□□ -0.73
CLK4-209ENST00000521621 ZBBXA8MT70 800 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 VTNP04004 478 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 RB1P06400 928 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 NAMPTP43490 491 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 CYP4A11Q02928 519 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 ECM1Q16610 540 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLK4-209ENST00000521621 MRPL10Q7Z7H8 261 aaKnown RBP10.52□□□□□ -0.73
CLK4-209ENST00000521621 LRRC71Q8N4P6 559 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 ZBTB10Q96DT7 871 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 PNMA5Q96PV4 448 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 NTPCRQ9BSD7 190 aaKnown RBP10.52□□□□□ -0.73
CLK4-209ENST00000521621 PLVAPQ9BX97 442 aa10.52□□□□□ -0.73
CLK4-209ENST00000521621 FNDC1Q4ZHG4 1894 aaPredicted RBP10.52□□□□□ -0.73
CLK4-209ENST00000521621 BRD1O95696 1058 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms