RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CDC42EP1Q00587 391 aa23.05■■□□□ 1.28
TRIM35-203ENST00000521253 EMC2Q15006 297 aa23.05■■□□□ 1.28
TRIM35-203ENST00000521253 RHPN2Q8IUC4 686 aa23.05■■□□□ 1.28
TRIM35-203ENST00000521253 ERMNQ8TAM6 284 aa23.05■■□□□ 1.28
TRIM35-203ENST00000521253 SP7Q8TDD2 431 aaPredicted RBP23.05■■□□□ 1.28
TRIM35-203ENST00000521253 PIGOQ8TEQ8 1089 aa23.05■■□□□ 1.28
TRIM35-203ENST00000521253 ARNTL2Q8WYA1 636 aa23.05■■□□□ 1.28
TRIM35-203ENST00000521253 TMEM143Q96AN5 459 aa23.05■■□□□ 1.28
TRIM35-203ENST00000521253 FOXD4L1Q9NU39 408 aa23.05■■□□□ 1.28
TRIM35-203ENST00000521253 A0A087WZ62 844 aa23.04■■□□□ 1.28
TRIM35-203ENST00000521253 VPS37CA5D8V6 355 aaPredicted RBP23.04■■□□□ 1.28
TRIM35-203ENST00000521253 EPOPA6NHQ4 379 aa23.04■■□□□ 1.28
TRIM35-203ENST00000521253 LAD1O00515 517 aa23.04■■□□□ 1.28
TRIM35-203ENST00000521253 PDCP20941 246 aa23.04■■□□□ 1.28
TRIM35-203ENST00000521253 RARRES1P49788 294 aa23.04■■□□□ 1.28
TRIM35-203ENST00000521253 ADGRE1Q14246 886 aa23.04■■□□□ 1.28
TRIM35-203ENST00000521253 FAM43BQ6ZT52 329 aaPredicted RBP23.04■■□□□ 1.28
TRIM35-203ENST00000521253 KSR1Q8IVT5 923 aa23.04■■□□□ 1.28
TRIM35-203ENST00000521253 CRIPAKQ8N1N5 446 aa23.04■■□□□ 1.28
TRIM35-203ENST00000521253 GAS2L1Q99501 681 aaPredicted RBP23.04■■□□□ 1.28
TRIM35-203ENST00000521253 ADAM2Q99965 735 aa23.04■■□□□ 1.28
TRIM35-203ENST00000521253 FDXACB1Q9BRP7 624 aaPredicted RBP23.04■■□□□ 1.28
TRIM35-203ENST00000521253 PRUNE2Q8WUY3 3088 aa23.04■■□□□ 1.28
TRIM35-203ENST00000521253 DENND3A2RUS2 1198 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 CSDE1O75534 798 aaKnown RBP23.03■■□□□ 1.28
TRIM35-203ENST00000521253 RPA1P27694 616 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 PDIA5Q14554 519 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 IL17AQ16552 155 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 POTEGQ6S5H5 508 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 ZNF410Q86VK4 478 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 PRPF31Q8WWY3 499 aaKnown RBP23.03■■□□□ 1.28
TRIM35-203ENST00000521253 PSPC1Q8WXF1 523 aaKnown RBP23.03■■□□□ 1.28
TRIM35-203ENST00000521253 NLRP4Q96MN2 994 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 CCDC43Q96MW1 224 aaKnown RBP23.03■■□□□ 1.28
TRIM35-203ENST00000521253 GCOM2Q9BZD3 368 aaPredicted RBP23.03■■□□□ 1.28
TRIM35-203ENST00000521253 XPNPEP1Q9NQW7 623 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 RGS18Q9NS28 235 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 LRWD1Q9UFC0 647 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 COL4A3BPQ9Y5P4 624 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 LOXHD1Q8IVV2 1947 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 MYO9BQ13459 2157 aa23.03■■□□□ 1.28
TRIM35-203ENST00000521253 RFXAPO00287 272 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 GAS2O43903 313 aaKnown RBP23.02■■□□□ 1.28
TRIM35-203ENST00000521253 XRCC6P12956 609 aaKnown RBP eCLIP23.02■■□□□ 1.28
TRIM35-203ENST00000521253 FGFR4P22455 802 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 PRPHP41219 470 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 ATP2C1P98194 919 aaPredicted RBP23.02■■□□□ 1.28
TRIM35-203ENST00000521253 DSC3Q14574 896 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 HAUS3Q68CZ6 603 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 BRAPQ7Z569 592 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 FERMT3Q86UX7 667 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 NPAS4Q8IUM7 802 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 IGSF22Q8N9C0 903 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 TGS1Q96RS0 853 aaKnown RBP23.02■■□□□ 1.28
TRIM35-203ENST00000521253 MTRQ99707 1265 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 RC3H2Q9HBD1 1191 aaKnown RBP23.02■■□□□ 1.28
TRIM35-203ENST00000521253 MTUS1Q9ULD2 1270 aa23.02■■□□□ 1.28
TRIM35-203ENST00000521253 TTC3P53804 2025 aa23.01■■□□□ 1.27
TRIM35-203ENST00000521253 DGAT1O75907 488 aa23.01■■□□□ 1.27
TRIM35-203ENST00000521253 SYT1P21579 422 aa23.01■■□□□ 1.27
TRIM35-203ENST00000521253 IBSPP21815 317 aaPredicted RBP23.01■■□□□ 1.27
TRIM35-203ENST00000521253 SARSP49591 514 aaKnown RBP23.01■■□□□ 1.27
TRIM35-203ENST00000521253 ERVK-21P61565 698 aa23.01■■□□□ 1.27
TRIM35-203ENST00000521253 DTHD1Q6ZMT9 781 aa23.01■■□□□ 1.27
TRIM35-203ENST00000521253 MAFAQ8NHW3 353 aaPredicted RBP23.01■■□□□ 1.27
TRIM35-203ENST00000521253 TCP11Q8WWU5 503 aa23.01■■□□□ 1.27
TRIM35-203ENST00000521253 NACC1Q96RE7 527 aa23.01■■□□□ 1.27
TRIM35-203ENST00000521253 RAB34Q9BZG1 259 aa23.01■■□□□ 1.27
TRIM35-203ENST00000521253 ATP6V0A4Q9HBG4 840 aa23.01■■□□□ 1.27
TRIM35-203ENST00000521253 C1orf112Q9NSG2 853 aa23.01■■□□□ 1.27
TRIM35-203ENST00000521253 C9IYK1 514 aa23■■□□□ 1.27
TRIM35-203ENST00000521253 DGKIO75912 1065 aa23■■□□□ 1.27
TRIM35-203ENST00000521253 STAG3L1P0CL83 205 aa23■■□□□ 1.27
TRIM35-203ENST00000521253 CCT6AP40227 531 aaKnown RBP23■■□□□ 1.27
TRIM35-203ENST00000521253 LAMTOR4Q0VGL1 99 aa23■■□□□ 1.27
TRIM35-203ENST00000521253 ECM1Q16610 540 aa23■■□□□ 1.27
TRIM35-203ENST00000521253 SLC24A5Q71RS6 500 aa23■■□□□ 1.27
TRIM35-203ENST00000521253 HSCBQ8IWL3 235 aa23■■□□□ 1.27
TRIM35-203ENST00000521253 ZNF689Q96CS4 500 aaPredicted RBP23■■□□□ 1.27
TRIM35-203ENST00000521253 C17orf80Q9BSJ5 609 aa23■■□□□ 1.27
TRIM35-203ENST00000521253 DBR1Q9UK59 544 aaKnown RBP23■■□□□ 1.27
TRIM35-203ENST00000521253 PP2D1A8MPX8 630 aa22.99■■□□□ 1.27
TRIM35-203ENST00000521253 USO1O60763 962 aaKnown RBP22.99■■□□□ 1.27
TRIM35-203ENST00000521253 SRGAP2CP0DJJ0 459 aa22.99■■□□□ 1.27
TRIM35-203ENST00000521253 MUTP22033 750 aa22.99■■□□□ 1.27
TRIM35-203ENST00000521253 IGFBP4P22692 258 aa22.99■■□□□ 1.27
TRIM35-203ENST00000521253 SNX29Q8TEQ0 813 aa22.99■■□□□ 1.27
TRIM35-203ENST00000521253 IFT122Q9HBG6 1241 aa22.99■■□□□ 1.27
TRIM35-203ENST00000521253 ADGRA3Q8IWK6 1321 aa22.99■■□□□ 1.27
TRIM35-203ENST00000521253 COL4A6Q14031 1691 aa22.99■■□□□ 1.27
TRIM35-203ENST00000521253 ASAP2O43150 1006 aa22.98■■□□□ 1.27
TRIM35-203ENST00000521253 ZSCAN20P17040 1043 aaPredicted RBP22.98■■□□□ 1.27
TRIM35-203ENST00000521253 SFPQP23246 707 aaKnown RBP eCLIP22.98■■□□□ 1.27
TRIM35-203ENST00000521253 FIBCD1Q8N539 461 aa22.98■■□□□ 1.27
TRIM35-203ENST00000521253 INO80BQ9C086 356 aaPredicted RBP22.98■■□□□ 1.27
TRIM35-203ENST00000521253 LRFN2Q9ULH4 789 aa22.98■■□□□ 1.27
TRIM35-203ENST00000521253 PCDHB7Q9Y5E2 793 aa22.98■■□□□ 1.27
TRIM35-203ENST00000521253 STK24Q9Y6E0 443 aa22.98■■□□□ 1.27
TRIM35-203ENST00000521253 ARID2Q68CP9 1835 aa22.97■■□□□ 1.27
TRIM35-203ENST00000521253 CDC25AP30304 524 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms