RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 BPIFA3Q9BQP9 254 aa16.63■□□□□ 0.25
SREK1-209ENST00000520953 NAT10Q9H0A0 1025 aaKnown RBP16.63■□□□□ 0.25
SREK1-209ENST00000520953 SUGCTQ9HAC7 445 aa16.63■□□□□ 0.25
SREK1-209ENST00000520953 PTPN22Q9Y2R2 807 aa16.63■□□□□ 0.25
SREK1-209ENST00000520953 ADGRA3Q8IWK6 1321 aa16.63■□□□□ 0.25
SREK1-209ENST00000520953 HBP1O60381 514 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 MAFO75444 373 aaPredicted RBP16.62■□□□□ 0.25
SREK1-209ENST00000520953 GCNT3O95395 438 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 SLC26A2P50443 739 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 PURAQ00577 322 aaKnown RBP16.62■□□□□ 0.25
SREK1-209ENST00000520953 TBC1D8BQ0IIM8 1120 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 PAK1Q13153 545 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 EPM2AIP1Q7L775 607 aaPredicted RBP16.62■□□□□ 0.25
SREK1-209ENST00000520953 UPF3AQ9H1J1 476 aaKnown RBP16.62■□□□□ 0.25
SREK1-209ENST00000520953 SETD4Q9NVD3 440 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 DDX20Q9UHI6 824 aaKnown RBP16.62■□□□□ 0.25
SREK1-209ENST00000520953 EVPLQ92817 2033 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 MKI67P46013 3256 aaKnown RBP16.62■□□□□ 0.25
SREK1-209ENST00000520953 SLC16A4O15374 487 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 CAVIN2O95810 425 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 HSPA8P11142 646 aaKnown RBP16.62■□□□□ 0.25
SREK1-209ENST00000520953 ATP1A3P13637 1013 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 PLS3P13797 630 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 GAP43P17677 238 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 PSMD2Q13200 908 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 ARHGEF6Q15052 776 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 MARCH8Q5T0T0 291 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 FAM178BQ8IXR5 827 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 SLC7A3Q8WY07 619 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 OLFML3Q9NRN5 406 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 SAMSN1Q9NSI8 373 aaKnown RBP16.62■□□□□ 0.25
SREK1-209ENST00000520953 FANCLQ9NW38 375 aa16.62■□□□□ 0.25
SREK1-209ENST00000520953 ZNF215Q9UL58 517 aaPredicted RBP16.62■□□□□ 0.25
SREK1-209ENST00000520953 BECN2A8MW95 431 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 C22orf31O95567 290 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 GLRA2P23416 452 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 NPTX2P47972 431 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 CLCN3P51790 818 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 MYL5Q02045 173 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 PPFIA1Q13136 1202 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 MFSD10Q14728 455 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 MTFR1Q15390 333 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 ANKRD40Q6AI12 368 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 ZNF720Q7Z2F6 126 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 DRC1Q96MC2 740 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 DACH1Q9UI36 760 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 NFE2L3Q9Y4A8 694 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 SMIM10L2AP0DMW4 78 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 SMIM10L2BP0DMW5 78 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 ERCC5P28715 1186 aaPredicted RBP16.61■□□□□ 0.25
SREK1-209ENST00000520953 ARL2P36404 184 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 PSEN2P49810 448 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 LBX1P52954 281 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 ZNF200P98182 395 aaPredicted RBP16.61■□□□□ 0.25
SREK1-209ENST00000520953 GRIK4Q16099 956 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 LHX8Q68G74 356 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 GUF1Q8N442 669 aaKnown RBP16.61■□□□□ 0.25
SREK1-209ENST00000520953 MCPH1Q8NEM0 835 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 DUSP9Q99956 384 aaKnown RBP16.61■□□□□ 0.25
SREK1-209ENST00000520953 UNC93B1Q9H1C4 597 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 USP20Q9Y2K6 914 aa16.61■□□□□ 0.25
SREK1-209ENST00000520953 IGKV6-21A0A0C4DH24 114 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 CCDC169A6NNP5 214 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 K7ENM7 598 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 KLRC1P26715 233 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 RFC5P40937 340 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 PRMT2P55345 433 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 TTI2Q6NXR4 508 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 METTL13Q8N6R0 699 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 KLHDC9Q8NEP7 349 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 ENOX1Q8TC92 643 aaKnown RBP16.6■□□□□ 0.25
SREK1-209ENST00000520953 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 P2RX5Q93086 422 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 ZNF830Q96NB3 372 aaPredicted RBP16.6■□□□□ 0.25
SREK1-209ENST00000520953 PPP1R16BQ96T49 567 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 ZMYM2Q9UBW7 1377 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 TRIP12Q14669 1992 aaPredicted RBP16.6■□□□□ 0.25
SREK1-209ENST00000520953 TISP43B9A030 160 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 HAS3O00219 553 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 PPP1R37O75864 691 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 KCNA10Q16322 511 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 COBLL1Q53SF7 1204 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 CCSAPQ6IQ19 270 aaPredicted RBP16.6■□□□□ 0.25
SREK1-209ENST00000520953 EFCAB12Q6NXP0 572 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 PRPF31Q8WWY3 499 aaKnown RBP16.6■□□□□ 0.25
SREK1-209ENST00000520953 KIFAP3Q92845 792 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 STRA6Q9BX79 667 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 KCTD10Q9H3F6 313 aa16.6■□□□□ 0.25
SREK1-209ENST00000520953 HMX1Q9NP08 348 aaPredicted RBP16.6■□□□□ 0.25
SREK1-209ENST00000520953 PSMA7O14818 248 aa16.59■□□□□ 0.25
SREK1-209ENST00000520953 IKBKBO14920 756 aa16.59■□□□□ 0.25
SREK1-209ENST00000520953 CCNE1P24864 410 aa16.59■□□□□ 0.25
SREK1-209ENST00000520953 ZNF484Q5JVG2 852 aa16.59■□□□□ 0.25
SREK1-209ENST00000520953 CENPPQ6IPU0 288 aa16.59■□□□□ 0.25
SREK1-209ENST00000520953 DHTKD1Q96HY7 919 aaPredicted RBP16.59■□□□□ 0.25
SREK1-209ENST00000520953 TIPINQ9BVW5 301 aa16.59■□□□□ 0.25
SREK1-209ENST00000520953 LARSQ9P2J5 1176 aaKnown RBP16.59■□□□□ 0.25
SREK1-209ENST00000520953 KAT6AQ92794 2004 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms