RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	PMS2P11	Q13670	270 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	HABP4	Q5JVS0	413 aa	Known RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	CIAPIN1	Q6FI81	312 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	LYPD4	Q6UWN0	246 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	PHYKPL	Q8IUZ5	450 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	SHISA5	Q8N114	240 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	FAM181A	Q8N9Y4	354 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	PHKB	Q93100	1093 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	GCC1	Q96CN9	775 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	TBC1D32	Q96NH3	1257 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	PPP1R16B	Q96T49	567 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	PLCD4	Q9BRC7	762 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	TRIT1	Q9H3H1	467 aa	Known RBP	4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	SLC6A20	Q9NP91	592 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	ITM2C	Q9NQX7	267 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	STXBP5L	Q9Y2K9	1186 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580	PCDHA13	Q9Y5I0	950 aa		4.36	□□□□□ -1.71
SREK1-208	ENST00000520580		H3BM21	787 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	PRPF6	O94906	941 aa	Known RBP	4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	PCDH8	O95206	1070 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	SMARCA1	P28370	1054 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	ADM	P35318	185 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	CASP2	P42575	452 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	MAP2K6	P52564	334 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	POLD3	Q15054	466 aa	Predicted RBP	4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	IZUMO3	Q5VZ72	239 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	CYP2R1	Q6VVX0	501 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	ZNF765	Q7L2R6	523 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	DPP9	Q86TI2	863 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	NLGN4X	Q8N0W4	816 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	SH2D3C	Q8N5H7	860 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	GPATCH11	Q8N954	259 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	ZNF527	Q8NB42	609 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	AGO4	Q9HCK5	861 aa	Known RBP	4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	USP18	Q9UMW8	372 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	ST20-MTHFS	A0A0A6YYL1	179 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	UBA6	A0AVT1	1052 aa	Predicted RBP	4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	KRIT1	O00522	736 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	FOXP2	O15409	715 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	TIMM44	O43615	452 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	CELA2B	P08218	269 aa	Predicted RBP	4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	ICA1	Q05084	483 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	STARD3	Q14849	445 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	EPHA7	Q15375	998 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	TAF5	Q15542	800 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	BTBD8	Q5XKL5	378 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	FAM180B	Q6P0A1	224 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	CCDC89	Q8N998	374 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	NGDN	Q8NEJ9	315 aa	Known RBP	4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	NEDD1	Q8NHV4	660 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	PLEKHO2	Q8TD55	490 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	FAM46A	Q96IP4	442 aa	Known RBP	4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	MYRFL	Q96LU7	910 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	HSPA12B	Q96MM6	686 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	CENPO	Q9BU64	300 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	ATP6V0A4	Q9HBG4	840 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	GJB4	Q9NTQ9	266 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	TMPRSS11E	Q9UL52	423 aa		4.35	□□□□□ -1.71
SREK1-208	ENST00000520580	RRN3P2	A6NIE6	340 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580		F8W8V4	182 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	MBD4	O95243	580 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	NTRK1	P04629	796 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	KIT	P10721	976 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	HSD3B1	P14060	373 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	GRIN1	Q05586	938 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	MALL	Q13021	153 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	MYBPC3	Q14896	1274 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	CCDC93	Q567U6	631 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	HYI	Q5T013	277 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	STEAP3	Q658P3	488 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	MZT2A	Q6P582	158 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	BEND4	Q6ZU67	534 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	LYSMD2	Q8IV50	215 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	ARMC10	Q8N2F6	343 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	FBXL6	Q8N531	539 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	ATG16L2	Q8NAA4	619 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	HIPK4	Q8NE63	616 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	GIMAP7	Q8NHV1	300 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	UHMK1	Q8TAS1	419 aa	Known RBP	4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	WHAMM	Q8TF30	809 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	RAX2	Q96IS3	184 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	GBP4	Q96PP9	640 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	ISCA1	Q9BUE6	129 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	GRHPR	Q9UBQ7	328 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	FBXO2	Q9UK22	296 aa	Predicted RBP	4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	RABGAP1	Q9Y3P9	1069 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580	USP19	O94966	1318 aa		4.34	□□□□□ -1.71
SREK1-208	ENST00000520580		J3KRW8	73 aa		4.34	□□□□□ -1.72
SREK1-208	ENST00000520580	CELA3B	P08861	270 aa		4.34	□□□□□ -1.72
SREK1-208	ENST00000520580	TSHR	P16473	764 aa		4.34	□□□□□ -1.72
SREK1-208	ENST00000520580	RASSF7	Q02833	373 aa		4.34	□□□□□ -1.72
SREK1-208	ENST00000520580	PPFIA1	Q13136	1202 aa		4.34	□□□□□ -1.72
SREK1-208	ENST00000520580	DGKK	Q5KSL6	1271 aa		4.34	□□□□□ -1.72
SREK1-208	ENST00000520580	PPP4R3A	Q6IN85	833 aa		4.34	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms