RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 UGCGQ16739 394 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 C10orf76Q5T2E6 689 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 CCDC181Q5TID7 509 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 RNF207Q6ZRF8 634 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 SAMD3Q8N6K7 520 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 PDCD2LQ9BRP1 358 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 PXMP2Q9NR77 195 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 TSKSQ9UJT2 592 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 NAGPAQ9UK23 515 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 TMEM150BA6NC51 233 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 LRRIQ3A6PVS8 624 aaPredicted RBP28.09■■■□□ 2.09
COL13A1-213ENST00000520267 VWA5AO00534 786 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 NSMFQ6X4W1 530 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 MSL3Q8N5Y2 521 aaKnown RBP28.09■■■□□ 2.09
COL13A1-213ENST00000520267 GOLGA5Q8TBA6 731 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 LARSQ9P2J5 1176 aaKnown RBP28.09■■■□□ 2.09
COL13A1-213ENST00000520267 PRDM4Q9UKN5 801 aa28.09■■■□□ 2.09
COL13A1-213ENST00000520267 SLC9A9Q8IVB4 645 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 RDH13Q8NBN7 331 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 MS4A14Q96JA4 679 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 LRRC1Q9BTT6 524 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 BCS1LQ9Y276 419 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 RIPK3Q9Y572 518 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 GRID2IPA4D2P6 1211 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 BTNL10A8MVZ5 291 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 EXOC3O60645 756 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 LYPLA2O95372 231 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 MATR3P43243 847 aaKnown RBP eCLIP28.08■■■□□ 2.09
COL13A1-213ENST00000520267 MEI1Q5TIA1 1274 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 ALKBH5Q6P6C2 394 aaKnown RBP28.08■■■□□ 2.09
COL13A1-213ENST00000520267 NENFQ9UMX5 172 aa28.08■■■□□ 2.09
COL13A1-213ENST00000520267 COL11A1P12107 1806 aaPredicted RBP28.08■■■□□ 2.09
COL13A1-213ENST00000520267 TISP43B9A030 160 aa28.07■■■□□ 2.08
COL13A1-213ENST00000520267 GFPT2O94808 682 aa28.07■■■□□ 2.08
COL13A1-213ENST00000520267 YWHABP31946 246 aaKnown RBP28.07■■■□□ 2.08
COL13A1-213ENST00000520267 PPP2R5AQ15172 486 aa28.07■■■□□ 2.08
COL13A1-213ENST00000520267 ZKSCAN4Q969J2 545 aaPredicted RBP28.07■■■□□ 2.08
COL13A1-213ENST00000520267 FZD1Q9UP38 647 aa28.07■■■□□ 2.08
COL13A1-213ENST00000520267 MYBL2P10244 700 aa28.07■■■□□ 2.08
COL13A1-213ENST00000520267 PAFAH1B1P43034 410 aa28.07■■■□□ 2.08
COL13A1-213ENST00000520267 PRAMEF18Q5VWM3 479 aa28.07■■■□□ 2.08
COL13A1-213ENST00000520267 CCNI2Q6ZMN8 369 aaPredicted RBP28.07■■■□□ 2.08
COL13A1-213ENST00000520267 HDAC7Q8WUI4 952 aa28.07■■■□□ 2.08
COL13A1-213ENST00000520267 HINFPQ9BQA5 517 aa28.07■■■□□ 2.08
COL13A1-213ENST00000520267 PACSIN2Q9UNF0 486 aaPredicted RBP28.07■■■□□ 2.08
COL13A1-213ENST00000520267 STAT1P42224 750 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 DNA2P51530 1060 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 BACE1P56817 501 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 BFSP1Q12934 665 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 ARHGEF16Q5VV41 709 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 TRMT1LQ7Z2T5 733 aaKnown RBP28.06■■■□□ 2.08
COL13A1-213ENST00000520267 GSPT2Q8IYD1 628 aaKnown RBP28.06■■■□□ 2.08
COL13A1-213ENST00000520267 SCYL3Q8IZE3 742 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 PCIF1Q9H4Z3 704 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 DNAJC12Q9UKB3 198 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 EIF3JO75822 258 aaKnown RBP28.06■■■□□ 2.08
COL13A1-213ENST00000520267 CCNE2O96020 404 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 MAPTP10636 758 aaKnown RBP28.06■■■□□ 2.08
COL13A1-213ENST00000520267 PLS3P13797 630 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 FERP16591 822 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 INTS2Q9H0H0 1204 aaKnown RBP28.06■■■□□ 2.08
COL13A1-213ENST00000520267 RNF146Q9NTX7 359 aa28.06■■■□□ 2.08
COL13A1-213ENST00000520267 RLFQ13129 1914 aa28.05■■■□□ 2.08
COL13A1-213ENST00000520267 TESPA1A2RU30 521 aaPredicted RBP28.05■■■□□ 2.08
COL13A1-213ENST00000520267 DDX3XO00571 662 aaKnown RBP eCLIP28.05■■■□□ 2.08
COL13A1-213ENST00000520267 BACH1O14867 736 aa28.05■■■□□ 2.08
COL13A1-213ENST00000520267 MRPS25P82663 173 aaKnown RBP28.05■■■□□ 2.08
COL13A1-213ENST00000520267 BAATQ14032 418 aaPredicted RBP28.05■■■□□ 2.08
COL13A1-213ENST00000520267 MAP9Q49MG5 647 aa28.05■■■□□ 2.08
COL13A1-213ENST00000520267 F8VZ95 297 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 N4BP1O75113 896 aaKnown RBP28.04■■■□□ 2.08
COL13A1-213ENST00000520267 ANXA13P27216 316 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 MYBPC2Q14324 1141 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 DCAF15Q66K64 600 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 CCDC70Q6NSX1 233 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 C4orf19Q8IY42 314 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 STK33Q9BYT3 514 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 TMEM206Q9H813 350 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 DMGDHQ9UI17 866 aaKnown RBP28.04■■■□□ 2.08
COL13A1-213ENST00000520267 FZD9O00144 591 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 EVI5O60447 810 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 SOX5P35711 763 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 FAM193AP78312 1265 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 MYL7Q01449 175 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 DRAP1Q14919 205 aaPredicted RBP28.04■■■□□ 2.08
COL13A1-213ENST00000520267 ACCSQ96QU6 501 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 GPRC5CQ9NQ84 441 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 RBM12Q9NTZ6 932 aaKnown RBP28.04■■■□□ 2.08
COL13A1-213ENST00000520267 ZNF112Q9UJU3 913 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 PNMA2Q9UL42 364 aa28.04■■■□□ 2.08
COL13A1-213ENST00000520267 PTPRAP18433 802 aa28.03■■■□□ 2.08
COL13A1-213ENST00000520267 DLG4P78352 724 aa28.03■■■□□ 2.08
COL13A1-213ENST00000520267 GPS2Q13227 327 aa28.03■■■□□ 2.08
COL13A1-213ENST00000520267 CFAP221Q4G0U5 840 aa28.03■■■□□ 2.08
COL13A1-213ENST00000520267 ZNF280CQ8ND82 737 aa28.03■■■□□ 2.08
COL13A1-213ENST00000520267 OLIG1Q8TAK6 271 aa28.03■■■□□ 2.08
COL13A1-213ENST00000520267 CCDC43Q96MW1 224 aaKnown RBP28.03■■■□□ 2.08
COL13A1-213ENST00000520267 WRNIP1Q96S55 665 aa28.03■■■□□ 2.08
COL13A1-213ENST00000520267 GPR88Q9GZN0 384 aa28.03■■■□□ 2.08
COL13A1-213ENST00000520267 FDX1P10109 184 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms