RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SLURP1P55000 103 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 IL13RA1P78552 427 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 TMPRSS15P98073 1019 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 ADCY2Q08462 1091 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 MAP3K12Q12852 859 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 WDR72Q3MJ13 1102 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 KANK2Q63ZY3 851 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 KIAA1841Q6NSI8 718 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 CRIP3Q6Q6R5 217 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 LRSAM1Q6UWE0 723 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 KANSL1Q7Z3B3 1105 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 HDGFL2Q7Z4V5 671 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 PRPF38AQ8NAV1 312 aaKnown RBP4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 CLRN3Q8NCR9 226 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 ZCCHC14Q8WYQ9 949 aaKnown RBP4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 RTF1Q92541 710 aaKnown RBP4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 RPGRQ92834 1020 aaKnown RBP4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 YTHDC1Q96MU7 727 aaKnown RBP4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 TMEM168Q9H0V1 697 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 USP40Q9NVE5 1235 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 MSRAQ9UJ68 235 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 K7ESF4 209 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 KDM1AO60341 852 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 KLHL18O94889 574 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 PRPF6O94906 941 aaKnown RBP4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 CYP1A1P04798 512 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 POLD1P28340 1107 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 CDKN1CP49918 316 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 PHF19Q5T6S3 580 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 PRAMEF9Q5VWM5 478 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 LHFPL2Q6ZUX7 228 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 FERMT3Q86UX7 667 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 REXO1L1PQ8IX06 675 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 IFNL2Q8IZJ0 200 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 ADAMTS17Q8TE56 1095 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 ZNF496Q96IT1 587 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 ACAP3Q96P50 834 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 MYL10Q9BUA6 226 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 PCED1AQ9H1Q7 454 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 POFUT1Q9H488 388 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 KCMF1Q9P0J7 381 aa4.52□□□□□ -1.69
HMGB1P41-201ENST00000520234 ST20-MTHFSA0A0A6YYL1 179 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 A0A0G2JNJ9 132 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 A0A1B0GTL3 188 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 RGS3P49796 1198 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 GUCY2FP51841 1108 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 CD83Q01151 205 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 KIAA2012Q0VF49 1180 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 MOGSQ13724 837 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 MYBPC3Q14896 1274 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 EIF4HQ15056 248 aaKnown RBP4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 GRAMD4Q6IC98 578 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 Q6ZUG5 572 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 FAM124AQ86V42 546 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 CXorf67Q86X51 503 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 ZNF761Q86XN6 746 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 ADGRG2Q8IZP9 1017 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 KLHL36Q8N4N3 616 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 TXNDC5Q8NBS9 432 aaKnown RBP4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 RSAD2Q8WXG1 361 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 FERMT2Q96AC1 680 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 AHCYL2Q96HN2 611 aaKnown RBP4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 AJUBAQ96IF1 538 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 LCORQ96JN0 433 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 BARX1Q9HBU1 254 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 TYW1Q9NV66 732 aaKnown RBP4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 Q9UFV3 132 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 DENND2AQ9ULE3 1009 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 SYNPO2Q9UMS6 1093 aa4.51□□□□□ -1.69
HMGB1P41-201ENST00000520234 A0A0A6YYJ9 748 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 PRKD3O94806 890 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 APOL3O95236 402 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 ETV4P43268 484 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 GJA9P57773 515 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 TOP3AQ13472 1001 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 NOLC1Q14978 699 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 TMEM200BQ69YZ2 307 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 MCTP2Q6DN12 878 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 OTOP2Q7RTS6 562 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 BMP8AQ7Z5Y6 402 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 ZNF575Q86XF7 245 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 ANKRD13AQ8IZ07 590 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 NUDT10Q8NFP7 164 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 NUDT11Q96G61 164 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 SAMD11Q96NU1 681 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 SPATA25Q9BR10 227 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 PITHD1Q9GZP4 211 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 KATNBL1Q9H079 304 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 TOPORSQ9NS56 1045 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 HOMER2Q9NSB8 354 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 ADAM29Q9UKF5 820 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 NUMBLQ9Y6R0 609 aa4.5□□□□□ -1.69
HMGB1P41-201ENST00000520234 MYPNQ86TC9 1320 aa4.49□□□□□ -1.69
HMGB1P41-201ENST00000520234 MROH6A6NGR9 719 aa4.49□□□□□ -1.69
HMGB1P41-201ENST00000520234 GOLGA8AA7E2F4 631 aa4.49□□□□□ -1.69
HMGB1P41-201ENST00000520234 GOLGA8BA8MQT2 603 aa4.49□□□□□ -1.69
HMGB1P41-201ENST00000520234 ELL2O00472 640 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P41-201ENST00000520234 GPR15P49685 360 aa4.49□□□□□ -1.69
HMGB1P41-201ENST00000520234 MANFP55145 182 aaKnown RBP4.49□□□□□ -1.69
HMGB1P41-201ENST00000520234 SESN2P58004 480 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms