RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 CDHR5Q9HBB8 845 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 KCND2Q9NZV8 630 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 NOC2LQ9Y3T9 749 aaKnown RBP12.85□□□□□ -0.35
SPIDR-212ENST00000519661 SRPRBQ9Y5M8 271 aaKnown RBP12.85□□□□□ -0.35
SPIDR-212ENST00000519661 TTC3P53804 2025 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 ENPP3O14638 875 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 RPS6KA5O75582 802 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 YEATS4O95619 227 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 EYA4O95677 639 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 BRD1O95696 1058 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 CYP11B2P19099 503 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 CD52P31358 61 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 KCNJ6P48051 423 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 POLGP54098 1239 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-212ENST00000519661 DEFB103AP81534 67 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 PAK2Q13177 524 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 KIZQ2M2Z5 673 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 SRGAP1Q7Z6B7 1085 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 RTN4RL1Q86UN2 441 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-212ENST00000519661 PRPF31Q8WWY3 499 aaKnown RBP12.84□□□□□ -0.35
SPIDR-212ENST00000519661 RAD9AQ99638 391 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 TIPINQ9BVW5 301 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-212ENST00000519661 ELAC1Q9H777 363 aaKnown RBP12.84□□□□□ -0.35
SPIDR-212ENST00000519661 ATP6V0A4Q9HBG4 840 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 CHST12Q9NRB3 414 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 RGS18Q9NS28 235 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 C1orf112Q9NSG2 853 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 SUCLA2Q9P2R7 463 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-212ENST00000519661 FBXO2Q9UK22 296 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-212ENST00000519661 ST3GAL5Q9UNP4 418 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 COL4A3BPQ9Y5P4 624 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 TRANK1O15050 2925 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 PTPRSQ13332 1948 aa12.84□□□□□ -0.35
SPIDR-212ENST00000519661 C9IYK1 514 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 PPP6R2O75170 966 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 SLC34A2O95436 690 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 F13A1P00488 732 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 AMHP03971 560 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 CCT6AP40227 531 aaKnown RBP12.83□□□□□ -0.36
SPIDR-212ENST00000519661 PTENP60484 403 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 LAMTOR4Q0VGL1 99 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 CDCA2Q69YH5 1023 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-212ENST00000519661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.83□□□□□ -0.36
SPIDR-212ENST00000519661 LINC00301Q8NCQ3 95 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 SNX29Q8TEQ0 813 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 PIGOQ8TEQ8 1089 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 ZNF689Q96CS4 500 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-212ENST00000519661 PNMA5Q96PV4 448 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 USP28Q96RU2 1077 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 OSMRQ99650 979 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 MTRQ99707 1265 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 GCOM2Q9BZD3 368 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-212ENST00000519661 TTYH1Q9H313 450 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-212ENST00000519661 SUGCTQ9HAC7 445 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 C17orf75Q9HAS0 396 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-212ENST00000519661 AKT3Q9Y243 479 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 YBX2Q9Y2T7 364 aaKnown RBP12.83□□□□□ -0.36
SPIDR-212ENST00000519661 CLIC4Q9Y696 253 aa12.83□□□□□ -0.36
SPIDR-212ENST00000519661 VWA3AA6NCI4 1184 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 ZNF623O75123 536 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 LINC00271P0C7V0 271 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 POU3F3P20264 500 aaPredicted RBP12.82□□□□□ -0.36
SPIDR-212ENST00000519661 GUCY2CP25092 1073 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 TMEM62Q0P6H9 643 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 GRB10Q13322 594 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 FAM187BQ17R55 369 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 PPP4R3CPQ6ZMV5 832 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 SLC24A5Q71RS6 500 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 TIFAQ96CG3 184 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 SH2D3AQ9BRG2 576 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 NTPCRQ9BSD7 190 aaKnown RBP12.82□□□□□ -0.36
SPIDR-212ENST00000519661 DDX19AQ9NUU7 478 aaKnown RBP12.82□□□□□ -0.36
SPIDR-212ENST00000519661 MTMR10Q9NXD2 777 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 MSRAQ9UJ68 235 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 KIAA1024Q9UPX6 916 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 DNM3Q9UQ16 869 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 INSL6Q9Y581 213 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 EVPLQ92817 2033 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 LOXHD1Q8IVV2 1947 aa12.82□□□□□ -0.36
SPIDR-212ENST00000519661 A0A087WZ62 844 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 A0A0U1RQF3 1178 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 ZBBXA8MT70 800 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 GRXCR1A8MXD5 290 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 MGEA5O60502 916 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 DGKIO75912 1065 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 HSP90AA1P07900 732 aaKnown RBP12.81□□□□□ -0.36
SPIDR-212ENST00000519661 SCP2P22307 547 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 SFPQP23246 707 aaKnown RBP eCLIP12.81□□□□□ -0.36
SPIDR-212ENST00000519661 GLRA2P23416 452 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 PBX2P40425 430 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 SARSP49591 514 aaKnown RBP12.81□□□□□ -0.36
SPIDR-212ENST00000519661 SLC12A3P55017 1021 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 GRIN1Q05586 938 aa12.81□□□□□ -0.36
SPIDR-212ENST00000519661 PKP1Q13835 747 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms