RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TRIM68Q6AZZ1 485 aa8.43□□□□□ -1.06
PTPN12-213ENST00000519553 LARP4Q71RC2 724 aaKnown RBP eCLIP8.43□□□□□ -1.06
PTPN12-213ENST00000519553 GPR155Q7Z3F1 870 aa8.43□□□□□ -1.06
PTPN12-213ENST00000519553 BMP8AQ7Z5Y6 402 aa8.43□□□□□ -1.06
PTPN12-213ENST00000519553 LYSMD2Q8IV50 215 aa8.43□□□□□ -1.06
PTPN12-213ENST00000519553 BARX1Q9HBU1 254 aaPredicted RBP8.43□□□□□ -1.06
PTPN12-213ENST00000519553 MAGEL2Q9UJ55 1249 aa8.43□□□□□ -1.06
PTPN12-213ENST00000519553 PTPN22Q9Y2R2 807 aa8.43□□□□□ -1.06
PTPN12-213ENST00000519553 STAT5BP51692 787 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 IGBP1P78318 339 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 DGKDQ16760 1214 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 ZNF827Q17R98 1081 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 PITRM1Q5JRX3 1037 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 SPOCD1Q6ZMY3 1216 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 IFNL2Q8IZJ0 200 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 CBARPQ8N350 705 aaPredicted RBP8.42□□□□□ -1.06
PTPN12-213ENST00000519553 FEZF2Q8TBJ5 459 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 STAG1Q8WVM7 1258 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 ORAI2Q96SN7 254 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 MENTQ9BUN1 341 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 WNT8AQ9H1J5 351 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 NUMBLQ9Y6R0 609 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 MYPNQ86TC9 1320 aa8.42□□□□□ -1.06
PTPN12-213ENST00000519553 WASHC2CQ9Y4E1 1318 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 ST20-MTHFSA0A0A6YYL1 179 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 B4GALT3O60512 393 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 PCDH8O95206 1070 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 CELA3BP08861 270 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 SCAND1P57086 179 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 ANAPC15P60006 121 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 FSCN1Q16658 493 aaKnown RBP8.41□□□□□ -1.06
PTPN12-213ENST00000519553 INAVAQ3KP66 663 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 CCDC62Q6P9F0 684 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 SLC41A1Q8IVJ1 513 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 ACAP3Q96P50 834 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 XYLT2Q9H1B5 865 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 HOMER2Q9NSB8 354 aa8.41□□□□□ -1.06
PTPN12-213ENST00000519553 A0A0A6YYK5 440 aaPredicted RBP8.4□□□□□ -1.06
PTPN12-213ENST00000519553 ENPP1P22413 925 aa8.4□□□□□ -1.06
PTPN12-213ENST00000519553 GPR3P46089 330 aa8.4□□□□□ -1.06
PTPN12-213ENST00000519553 TRIM25Q14258 630 aaKnown RBP8.4□□□□□ -1.06
PTPN12-213ENST00000519553 USP10Q14694 798 aaKnown RBP8.4□□□□□ -1.06
PTPN12-213ENST00000519553 BRDTQ58F21 947 aaPredicted RBP8.4□□□□□ -1.06
PTPN12-213ENST00000519553 CT83Q5H943 113 aa8.4□□□□□ -1.06
PTPN12-213ENST00000519553 NKD2Q969F2 451 aaPredicted RBP8.4□□□□□ -1.06
PTPN12-213ENST00000519553 SOX7Q9BT81 388 aa8.4□□□□□ -1.06
PTPN12-213ENST00000519553 CARD11Q9BXL7 1154 aa8.4□□□□□ -1.06
PTPN12-213ENST00000519553 KIAA1683Q9H0B3 1180 aa8.4□□□□□ -1.06
PTPN12-213ENST00000519553 CCDC8Q9H0W5 538 aaPredicted RBP8.4□□□□□ -1.06
PTPN12-213ENST00000519553 POLR3BQ9NW08 1133 aaPredicted RBP8.4□□□□□ -1.06
PTPN12-213ENST00000519553 TRHDEQ9UKU6 1024 aa8.4□□□□□ -1.06
PTPN12-213ENST00000519553 BTBD11A6QL63 1104 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 GOLGA8AA7E2F4 631 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 GOLGA8BA8MQT2 603 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 KLF1Q13351 362 aaPredicted RBP8.39□□□□□ -1.07
PTPN12-213ENST00000519553 SYDE2Q5VT97 1194 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 RALYLQ86SE5 291 aaKnown RBP8.39□□□□□ -1.07
PTPN12-213ENST00000519553 KBTBD2Q8IY47 623 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 TGFBRAP1Q8WUH2 860 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 EAF2Q96CJ1 260 aaPredicted RBP8.39□□□□□ -1.07
PTPN12-213ENST00000519553 MTMR8Q96EF0 704 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 DYDC2Q96IM9 177 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 NOL10Q9BSC4 688 aaKnown RBP8.39□□□□□ -1.07
PTPN12-213ENST00000519553 ASPSCR1Q9BZE9 553 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.39□□□□□ -1.07
PTPN12-213ENST00000519553 SAE1Q9UBE0 346 aaPredicted RBP8.39□□□□□ -1.07
PTPN12-213ENST00000519553 ZDHHC9Q9Y397 364 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 PCDHB6Q9Y5E3 794 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 DUSP10Q9Y6W6 482 aa8.39□□□□□ -1.07
PTPN12-213ENST00000519553 OTOL1A6NHN0 477 aaPredicted RBP8.38□□□□□ -1.07
PTPN12-213ENST00000519553 GABRDO14764 452 aa8.38□□□□□ -1.07
PTPN12-213ENST00000519553 H2AFYO75367 372 aaKnown RBP8.38□□□□□ -1.07
PTPN12-213ENST00000519553 LPLP06858 475 aa8.38□□□□□ -1.07
PTPN12-213ENST00000519553 IARSP41252 1262 aaKnown RBP8.38□□□□□ -1.07
PTPN12-213ENST00000519553 RRADP55042 308 aa8.38□□□□□ -1.07
PTPN12-213ENST00000519553 KIAA2012Q0VF49 1180 aa8.38□□□□□ -1.07
PTPN12-213ENST00000519553 PCOLCEQ15113 449 aa8.38□□□□□ -1.07
PTPN12-213ENST00000519553 FAM124AQ86V42 546 aa8.38□□□□□ -1.07
PTPN12-213ENST00000519553 CDYL2Q8N8U2 506 aa8.38□□□□□ -1.07
PTPN12-213ENST00000519553 KCTD10Q9H3F6 313 aa8.38□□□□□ -1.07
PTPN12-213ENST00000519553 CCM2LQ9NUG4 571 aaPredicted RBP8.38□□□□□ -1.07
PTPN12-213ENST00000519553 TYW1Q9NV66 732 aaKnown RBP8.38□□□□□ -1.07
PTPN12-213ENST00000519553 DDX56Q9NY93 547 aaKnown RBP8.38□□□□□ -1.07
PTPN12-213ENST00000519553 PRSS50Q9UI38 385 aa8.38□□□□□ -1.07
PTPN12-213ENST00000519553 KCNG1Q9UIX4 513 aa8.38□□□□□ -1.07
PTPN12-213ENST00000519553 SASH1O94885 1247 aa8.37□□□□□ -1.07
PTPN12-213ENST00000519553 MRE11P49959 708 aa8.37□□□□□ -1.07
PTPN12-213ENST00000519553 ITKQ08881 620 aa8.37□□□□□ -1.07
PTPN12-213ENST00000519553 TBR1Q16650 682 aa8.37□□□□□ -1.07
PTPN12-213ENST00000519553 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPN12-213ENST00000519553 AGBL4Q5VU57 503 aa8.37□□□□□ -1.07
PTPN12-213ENST00000519553 PPP1R14CQ8TAE6 165 aa8.37□□□□□ -1.07
PTPN12-213ENST00000519553 FDXACB1Q9BRP7 624 aaPredicted RBP8.37□□□□□ -1.07
PTPN12-213ENST00000519553 PARD6AQ9NPB6 346 aa8.37□□□□□ -1.07
PTPN12-213ENST00000519553 USP40Q9NVE5 1235 aa8.37□□□□□ -1.07
PTPN12-213ENST00000519553 DNAI1Q9UI46 699 aa8.37□□□□□ -1.07
PTPN12-213ENST00000519553 VWA7Q9Y334 891 aa8.37□□□□□ -1.07
PTPN12-213ENST00000519553 WASHC2AQ641Q2 1341 aa8.36□□□□□ -1.07
PTPN12-213ENST00000519553 KRTAP4-8A0A0G2JLE6 195 aa8.36□□□□□ -1.07
PTPN12-213ENST00000519553 MAFGO15525 162 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms