RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PPFIBP1Q86W92 1011 aa15.97■□□□□ 0.15
CLN8-204ENST00000519254 NELFCDQ8IXH7 590 aa15.97■□□□□ 0.15
CLN8-204ENST00000519254 CCAR2Q8N163 923 aaKnown RBP15.97■□□□□ 0.15
CLN8-204ENST00000519254 TSG101Q99816 390 aa15.97■□□□□ 0.15
CLN8-204ENST00000519254 DBR1Q9UK59 544 aaKnown RBP15.97■□□□□ 0.15
CLN8-204ENST00000519254 MYH9P35579 1960 aaKnown RBP15.96■□□□□ 0.15
CLN8-204ENST00000519254 A0A1W2PQC6 194 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 USO1O60763 962 aaKnown RBP15.96■□□□□ 0.15
CLN8-204ENST00000519254 FGFR1OPO95684 399 aaKnown RBP15.96■□□□□ 0.15
CLN8-204ENST00000519254 GNRH1P01148 92 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 OATP04181 439 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 ZNF286BP0CG31 522 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 CYBAP13498 195 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 PRKCSHP14314 528 aaPredicted RBP15.96■□□□□ 0.15
CLN8-204ENST00000519254 AKR1A1P14550 325 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 ATP4AP20648 1035 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 HOXD13P35453 343 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 MTIF2P46199 727 aaKnown RBP15.96■□□□□ 0.15
CLN8-204ENST00000519254 RARRES1P49788 294 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 IRF5Q13568 498 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 OTUD6AQ7L8S5 288 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 CPLX3Q8WVH0 158 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 EMID1Q96A84 441 aaPredicted RBP15.96■□□□□ 0.15
CLN8-204ENST00000519254 CEP170P1Q96L14 293 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 PANX2Q96RD6 677 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 WBP1LQ9NX94 342 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 GNEQ9Y223 722 aaKnown RBP15.96■□□□□ 0.15
CLN8-204ENST00000519254 TRIM17Q9Y577 477 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.96■□□□□ 0.15
CLN8-204ENST00000519254 COL4A3BPQ9Y5P4 624 aa15.96■□□□□ 0.15
CLN8-204ENST00000519254 RNF225M0QZC1 329 aaPredicted RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 TBCAO75347 108 aaKnown RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 STBD1O95210 358 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 PRKAR2AP13861 404 aaKnown RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 GAP43P17677 238 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 CASP14P31944 242 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 DNM2P50570 870 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 FXR1P51114 621 aaKnown RBP eCLIP15.95■□□□□ 0.14
CLN8-204ENST00000519254 CACNB2Q08289 660 aaPredicted RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 MTERF2Q49AM1 385 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 XKR3Q5GH77 459 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 MAEAQ7L5Y9 396 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 AFAP1L1Q8TED9 768 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 BAG1Q99933 345 aaPredicted RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 ANKEF1Q9NU02 776 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 KCND2Q9NZV8 630 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 SFI1A8K8P3 1242 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 STX10O60499 249 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 MFAP3LO75121 409 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 LGR5O75473 907 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 KIF20AO95235 890 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 LGALS2P05162 132 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 MMP3P08254 477 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 MYBP10242 640 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 ZNF131P52739 623 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 IRX5P78411 483 aaPredicted RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 FKBP3Q00688 224 aaKnown RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 DNTTIP2Q5QJE6 756 aaKnown RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 ZC3H3Q8IXZ2 948 aaKnown RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 NOC4LQ9BVI4 516 aaKnown RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 AP5M1Q9H0R1 490 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 SMARCAD1Q9H4L7 1026 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 OLFML3Q9NRN5 406 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 TRMT1Q9NXH9 659 aaKnown RBP15.95■□□□□ 0.14
CLN8-204ENST00000519254 EMSYQ7Z589 1322 aa15.95■□□□□ 0.14
CLN8-204ENST00000519254 PES1O00541 588 aaKnown RBP15.94■□□□□ 0.14
CLN8-204ENST00000519254 FAM13AO94988 1023 aa15.94■□□□□ 0.14
CLN8-204ENST00000519254 HMGCRP04035 888 aa15.94■□□□□ 0.14
CLN8-204ENST00000519254 GUCY2CP25092 1073 aa15.94■□□□□ 0.14
CLN8-204ENST00000519254 BMT2Q1RMZ1 405 aa15.94■□□□□ 0.14
CLN8-204ENST00000519254 MRPL44Q9H9J2 332 aaKnown RBP15.94■□□□□ 0.14
CLN8-204ENST00000519254 ARID2Q68CP9 1835 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 ARHGAP6O43182 974 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 PRPF6O94906 941 aaKnown RBP15.93■□□□□ 0.14
CLN8-204ENST00000519254 TPM2P07951 284 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 CCND3P30281 292 aaPredicted RBP15.93■□□□□ 0.14
CLN8-204ENST00000519254 CHMP4BP1P59074 171 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 TBC1D8BQ0IIM8 1120 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 TRIM14Q14142 442 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 DGKDQ16760 1214 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 KNOP1Q1ED39 458 aaKnown RBP15.93■□□□□ 0.14
CLN8-204ENST00000519254 EDRF1Q3B7T1 1238 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 PLPPR4Q7Z2D5 763 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 DNAJC5GQ8N7S2 189 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 C16orf45Q96MC5 204 aaPredicted RBP15.93■□□□□ 0.14
CLN8-204ENST00000519254 CEP63Q96MT8 703 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 FIZ1Q96SL8 496 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 CYP26B1Q9NR63 512 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 NRBP2Q9NSY0 501 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 ODF2LQ9ULJ1 636 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 TRPC6Q9Y210 931 aa15.93■□□□□ 0.14
CLN8-204ENST00000519254 HIP1RO75146 1068 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 BEX3Q00994 111 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 MAPK7Q13164 816 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 PLCB4Q15147 1175 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 MAN2A1Q16706 1144 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 VWA3BQ502W6 1294 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 PPP4R3CPQ6ZMV5 832 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 NYAP1Q6ZVC0 841 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 CNGA4Q8IV77 575 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms