RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 LRRFIP1Q32MZ4 808 aaKnown RBP7.12□□□□□ -1.27
PABPC1-207ENST00000518716 HSP90AB4PQ58FF6 505 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 NFXL1Q6ZNB6 911 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 ACAD11Q709F0 780 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 FAM160B2Q86V87 743 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 AMOTL1Q8IY63 956 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 LRRC47Q8N1G4 583 aaKnown RBP7.12□□□□□ -1.27
PABPC1-207ENST00000518716 RETREG2Q8NC44 543 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 PPP1R13LQ8WUF5 828 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 CHURC1Q8WUH1 139 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 SCG3Q8WXD2 468 aaKnown RBP7.12□□□□□ -1.27
PABPC1-207ENST00000518716 KAT2BQ92831 832 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 OSBP2Q969R2 916 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 KIF1BPQ96EK5 621 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 TGS1Q96RS0 853 aaKnown RBP7.12□□□□□ -1.27
PABPC1-207ENST00000518716 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.12□□□□□ -1.27
PABPC1-207ENST00000518716 MKNK2Q9HBH9 465 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 KCNK4Q9NYG8 393 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 TRIM33Q9UPN9 1127 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 GVINP1Q7Z2Y8 2422 aa7.12□□□□□ -1.27
PABPC1-207ENST00000518716 ABHD14A-ACY1A0A1B0GW23 586 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 NKRFO15226 690 aaKnown RBP eCLIP7.11□□□□□ -1.27
PABPC1-207ENST00000518716 PRDM1O75626 825 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 MYL3P08590 195 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 IFIT2P09913 472 aaKnown RBP7.11□□□□□ -1.27
PABPC1-207ENST00000518716 ALAS1P13196 640 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 LTBRP36941 435 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 ATP1A2P50993 1020 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 ALDH5A1P51649 535 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-207ENST00000518716 HTRA4P83105 476 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-207ENST00000518716 BFSP2Q13515 415 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 BAATQ14032 418 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-207ENST00000518716 TRIM71Q2Q1W2 868 aaKnown RBP7.11□□□□□ -1.27
PABPC1-207ENST00000518716 RCSD1Q6JBY9 416 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 CNKSR3Q6P9H4 555 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 TICAM2Q86XR7 235 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 CAGE1Q8TC20 777 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 AFAP1L1Q8TED9 768 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 CLEC4DQ8WXI8 215 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 MRPL38Q96DV4 380 aaKnown RBP7.11□□□□□ -1.27
PABPC1-207ENST00000518716 ASIC4Q96FT7 647 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 FTOQ9C0B1 505 aaKnown RBP eCLIP7.11□□□□□ -1.27
PABPC1-207ENST00000518716 RANBP17Q9H2T7 1088 aaKnown RBP7.11□□□□□ -1.27
PABPC1-207ENST00000518716 PRKAG3Q9UGI9 489 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 MYH7P12883 1935 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 SIP14410 1827 aa7.11□□□□□ -1.27
PABPC1-207ENST00000518716 MINDY4BA8MYZ0 360 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 RAB11FIP3O75154 756 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 PARNO95453 639 aaKnown RBP7.1□□□□□ -1.27
PABPC1-207ENST00000518716 ICAM1P05362 532 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 ITGB5P18084 799 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 MCCP23508 829 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 SLC1A4P43007 532 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 SNAP25P60880 206 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 FBLN7Q53RD9 439 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 HERC4Q5GLZ8 1057 aaPredicted RBP7.1□□□□□ -1.27
PABPC1-207ENST00000518716 CCDC62Q6P9F0 684 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 BTNL9Q6UXG8 535 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 SPOCD1Q6ZMY3 1216 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 BMP8AQ7Z5Y6 402 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 ITPRIPQ8IWB1 547 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 ADHFE1Q8IWW8 467 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 FAM20CQ8IXL6 584 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 ZNF444Q8N0Y2 327 aaPredicted RBP7.1□□□□□ -1.27
PABPC1-207ENST00000518716 OR6J1Q8NGC5 347 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 COPS5Q92905 334 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 PABPC5Q96DU9 382 aaKnown RBP7.1□□□□□ -1.27
PABPC1-207ENST00000518716 NSUN5Q96P11 429 aaKnown RBP7.1□□□□□ -1.27
PABPC1-207ENST00000518716 FAM83CQ9BQN1 747 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 C17orf80Q9BSJ5 609 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 IL17RBQ9NRM6 502 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 KLK14Q9P0G3 267 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 CTDP1Q9Y5B0 961 aaPredicted RBP7.1□□□□□ -1.27
PABPC1-207ENST00000518716 C5orf42Q9H799 3197 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 MICAL3Q7RTP6 2002 aa7.1□□□□□ -1.27
PABPC1-207ENST00000518716 PATL2C9JE40 543 aaKnown RBP7.09□□□□□ -1.27
PABPC1-207ENST00000518716 H3BQ06 376 aaPredicted RBP7.09□□□□□ -1.27
PABPC1-207ENST00000518716 NFIBO00712 420 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 EFCAB14O75071 495 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 ARIH2O95376 493 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 LINC00271P0C7V0 271 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 CKBP12277 381 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 KCNJ6P48051 423 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 ARSDP51689 593 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 TCF15Q12870 199 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 SMAD2Q15796 467 aaKnown RBP7.09□□□□□ -1.27
PABPC1-207ENST00000518716 PTGISQ16647 500 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 GLIPR1L2Q4G1C9 344 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 FAM47CQ5HY64 1035 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 ZSCAN25Q6NSZ9 544 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 KCTD1Q719H9 257 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 LRRC8DQ7L1W4 858 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 RASGRP2Q7LDG7 609 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 IFNL3Q8IZI9 196 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 SIX5Q8N196 739 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 STK11IPQ8N1F8 1099 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 PRSS33Q8NF86 280 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 APPBP2Q92624 585 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 WNT8BQ93098 351 aa7.09□□□□□ -1.27
PABPC1-207ENST00000518716 UIMC1Q96RL1 719 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms