RNA–Protein interactions for RNA: ENST00000518585.1

CTNNA1-209, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-209ENST00000518585 HLA-DQA1Q5Y7H0 255 aa4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 BICRALQ6AI39 1079 aa4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 ANKRD7Q92527 254 aa4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 RPGRQ92834 1020 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 FAM89AQ96GI7 184 aa4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 PDLIM2Q96JY6 352 aa4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 ISCA1Q9BUE6 129 aa4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 AP5S1Q9NUS5 200 aa4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 TRMT112Q9UI30 125 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 MINPP1Q9UNW1 487 aa4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 MORC2Q9Y6X9 1032 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-209ENST00000518585 SPEF2Q9C093 1822 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 RIC1Q4ADV7 1423 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 GOLGB1Q14789 3259 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 SH3TC1Q8TE82 1336 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 LTBP3Q9NS15 1303 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 PI4KAP2A4QPH2 592 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 GOLGA6L6A8MZA4 724 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 F6X3S4 739 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 DHX16O60231 1041 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 ACVRL1P37023 503 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 CCT4P50991 539 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 LMNB2Q03252 620 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 DLX2Q07687 328 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 CAMK2GQ13555 558 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 TBC1D10BQ4KMP7 808 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 ARSHQ5FYA8 562 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 SLC10A5Q5PT55 438 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 SOGA3Q5TF21 947 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 MEI1Q5TIA1 1274 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 KSR2Q6VAB6 950 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 SPRED1Q7Z699 444 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 B3GNT8Q7Z7M8 397 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 ZNF761Q86XN6 746 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 Q8N1X5 172 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 PI4KAP1Q8N8J0 262 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 DNAAF4Q8WXU2 420 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 ALG3Q92685 438 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 CHMP4CQ96CF2 233 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 RBM17Q96I25 401 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 FAM210AQ96ND0 272 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 CRAMP1Q96RY5 1269 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 MYD88Q99836 296 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 C1orf115Q9H7X2 142 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 PRDM16Q9HAZ2 1276 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 ZNF277Q9NRM2 450 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 DIAPH3Q9NSV4 1193 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 MAP3K2Q9Y2U5 619 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 POLR3KQ9Y2Y1 108 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 HCFC2Q9Y5Z7 792 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 CACNA1SQ13698 1873 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 NRXN2Q9P2S2 1712 aa4.83□□□□□ -1.64
CTNNA1-209ENST00000518585 SNED1Q8TER0 1413 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 ZNF536O15090 1300 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 GLTPD2A6NH11 291 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 F8W031 263 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 GOLGA6L22H0YM25 854 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 PPP1R12AO14974 1030 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 CLEC3AO75596 197 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 IGKV5-2P06315 115 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 MC3RP41968 323 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 TDO2P48775 406 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 ZNF445P59923 1031 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 PRR5P85299 388 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 KIAA2012Q0VF49 1180 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 INTS3Q68E01 1043 aaKnown RBP4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 CRIP3Q6Q6R5 217 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 GLB1LQ6UWU2 654 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 CCDC91Q7Z6B0 441 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 GAS2L3Q86XJ1 694 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 RTKN2Q8IZC4 609 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 ITFG2Q969R8 447 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 GBP4Q96PP9 640 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 SLKQ9H2G2 1235 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 RSPH14Q9UHP6 348 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 PLA2G2DQ9UNK4 145 aa4.82□□□□□ -1.64
CTNNA1-209ENST00000518585 DDX60Q8IY21 1712 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 ZNF541Q9H0D2 1346 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 PRPF40AO75400 957 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 TOMM70O94826 608 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 DDNO94850 711 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 REC8O95072 547 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 PF4P02776 101 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 ASGR2P07307 311 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 NEFHP12036 1026 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 VAV1P15498 845 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 CASQ1P31415 396 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 IARSP41252 1262 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 GSCP56915 257 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 GRAPQ13588 217 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 MPP2Q14168 576 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 SF3B3Q15393 1217 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 CWF19L2Q2TBE0 894 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 MUM1L1Q5H9M0 696 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 DDX46Q7L014 1031 aaKnown RBP4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 LGI4Q8N135 537 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 ZBTB38Q8NAP3 1195 aaPredicted RBP4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 CCDC191Q8NCU4 936 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 TMEM52Q8NDY8 209 aa4.81□□□□□ -1.64
CTNNA1-209ENST00000518585 GRAPLQ8TC17 118 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms