RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 ANKEF1Q9NU02 776 aa20.84■□□□□ 0.93
FAM49B-208ENST00000518344 LRWD1Q9UFC0 647 aa20.84■□□□□ 0.93
FAM49B-208ENST00000518344 GBF1Q92538 1859 aa20.84■□□□□ 0.93
FAM49B-208ENST00000518344 A0A087WZ62 844 aa20.83■□□□□ 0.93
FAM49B-208ENST00000518344 MGEA5O60502 916 aa20.83■□□□□ 0.93
FAM49B-208ENST00000518344 CSDE1O75534 798 aaKnown RBP20.83■□□□□ 0.93
FAM49B-208ENST00000518344 DARSP14868 501 aaKnown RBP20.83■□□□□ 0.93
FAM49B-208ENST00000518344 FGFR4P22455 802 aa20.83■□□□□ 0.93
FAM49B-208ENST00000518344 FXR2P51116 673 aaKnown RBP eCLIP20.83■□□□□ 0.93
FAM49B-208ENST00000518344 ADGRE1Q14246 886 aa20.83■□□□□ 0.93
FAM49B-208ENST00000518344 EMC2Q15006 297 aa20.83■□□□□ 0.93
FAM49B-208ENST00000518344 MAFAQ8NHW3 353 aaPredicted RBP20.83■□□□□ 0.93
FAM49B-208ENST00000518344 NLRP4Q96MN2 994 aa20.83■□□□□ 0.93
FAM49B-208ENST00000518344 TGS1Q96RS0 853 aaKnown RBP20.83■□□□□ 0.93
FAM49B-208ENST00000518344 FDXACB1Q9BRP7 624 aaPredicted RBP20.83■□□□□ 0.93
FAM49B-208ENST00000518344 POLR3CQ9BUI4 534 aaPredicted RBP20.83■□□□□ 0.93
FAM49B-208ENST00000518344 TUFT1Q9NNX1 390 aa20.83■□□□□ 0.93
FAM49B-208ENST00000518344 LRFN2Q9ULH4 789 aa20.83■□□□□ 0.93
FAM49B-208ENST00000518344 PTPRSQ13332 1948 aa20.82■□□□□ 0.92
FAM49B-208ENST00000518344 EPOPA6NHQ4 379 aa20.82■□□□□ 0.92
FAM49B-208ENST00000518344 LAD1O00515 517 aa20.82■□□□□ 0.92
FAM49B-208ENST00000518344 PDCP20941 246 aa20.82■□□□□ 0.92
FAM49B-208ENST00000518344 TCP11Q8WWU5 503 aa20.82■□□□□ 0.92
FAM49B-208ENST00000518344 PRPF31Q8WWY3 499 aaKnown RBP20.82■□□□□ 0.92
FAM49B-208ENST00000518344 PSPC1Q8WXF1 523 aaKnown RBP20.82■□□□□ 0.92
FAM49B-208ENST00000518344 INTS4Q96HW7 963 aaKnown RBP20.82■□□□□ 0.92
FAM49B-208ENST00000518344 MTRQ99707 1265 aa20.82■□□□□ 0.92
FAM49B-208ENST00000518344 RGS18Q9NS28 235 aa20.82■□□□□ 0.92
FAM49B-208ENST00000518344 PCDHB7Q9Y5E2 793 aa20.82■□□□□ 0.92
FAM49B-208ENST00000518344 COL4A3BPQ9Y5P4 624 aa20.82■□□□□ 0.92
FAM49B-208ENST00000518344 CDH23Q9H251 3354 aa20.82■□□□□ 0.92
FAM49B-208ENST00000518344 STAG3L1P0CL83 205 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 SRGAP2CP0DJJ0 459 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 XRCC6P12956 609 aaKnown RBP eCLIP20.81■□□□□ 0.92
FAM49B-208ENST00000518344 ZSCAN20P17040 1043 aaPredicted RBP20.81■□□□□ 0.92
FAM49B-208ENST00000518344 RPA1P27694 616 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 CCT6AP40227 531 aaKnown RBP20.81■□□□□ 0.92
FAM49B-208ENST00000518344 SARSP49591 514 aaKnown RBP20.81■□□□□ 0.92
FAM49B-208ENST00000518344 RARRES1P49788 294 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 ERVK-21P61565 698 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 PDIA5Q14554 519 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 DTHD1Q6ZMT9 781 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 FAM43BQ6ZT52 329 aaPredicted RBP20.81■□□□□ 0.92
FAM49B-208ENST00000518344 FERMT3Q86UX7 667 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 ZNF410Q86VK4 478 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 NPAS4Q8IUM7 802 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 FIBCD1Q8N539 461 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 SP7Q8TDD2 431 aaPredicted RBP20.81■□□□□ 0.92
FAM49B-208ENST00000518344 PPM1EQ8WY54 764 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 NACC1Q96RE7 527 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 C17orf80Q9BSJ5 609 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 RAB34Q9BZG1 259 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 C1orf112Q9NSG2 853 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 MICAL3Q7RTP6 2002 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 EVPLQ92817 2033 aa20.81■□□□□ 0.92
FAM49B-208ENST00000518344 WDR81Q562E7 1941 aa20.8■□□□□ 0.92
FAM49B-208ENST00000518344 GAS2O43903 313 aaKnown RBP20.8■□□□□ 0.92
FAM49B-208ENST00000518344 DGAT1O75907 488 aa20.8■□□□□ 0.92
FAM49B-208ENST00000518344 DGKIO75912 1065 aa20.8■□□□□ 0.92
FAM49B-208ENST00000518344 HAUS3Q68CZ6 603 aa20.8■□□□□ 0.92
FAM49B-208ENST00000518344 POTEGQ6S5H5 508 aa20.8■□□□□ 0.92
FAM49B-208ENST00000518344 SLC24A5Q71RS6 500 aa20.8■□□□□ 0.92
FAM49B-208ENST00000518344 BRAPQ7Z569 592 aa20.8■□□□□ 0.92
FAM49B-208ENST00000518344 HSCBQ8IWL3 235 aa20.8■□□□□ 0.92
FAM49B-208ENST00000518344 SNX21Q969T3 373 aa20.8■□□□□ 0.92
FAM49B-208ENST00000518344 INO80BQ9C086 356 aaPredicted RBP20.8■□□□□ 0.92
FAM49B-208ENST00000518344 ATP6V0A4Q9HBG4 840 aa20.8■□□□□ 0.92
FAM49B-208ENST00000518344 SYT1P21579 422 aa20.79■□□□□ 0.92
FAM49B-208ENST00000518344 PRPHP41219 470 aa20.79■□□□□ 0.92
FAM49B-208ENST00000518344 LAMTOR4Q0VGL1 99 aa20.79■□□□□ 0.92
FAM49B-208ENST00000518344 BTG3Q14201 252 aaPredicted RBP20.79■□□□□ 0.92
FAM49B-208ENST00000518344 DSC3Q14574 896 aa20.79■□□□□ 0.92
FAM49B-208ENST00000518344 IL17AQ16552 155 aa20.79■□□□□ 0.92
FAM49B-208ENST00000518344 MAEAQ7L5Y9 396 aa20.79■□□□□ 0.92
FAM49B-208ENST00000518344 MICALL1Q8N3F8 863 aa20.79■□□□□ 0.92
FAM49B-208ENST00000518344 IGSF22Q8N9C0 903 aa20.79■□□□□ 0.92
FAM49B-208ENST00000518344 XPNPEP1Q9NQW7 623 aa20.79■□□□□ 0.92
FAM49B-208ENST00000518344 PP2D1A8MPX8 630 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 C9IYK1 514 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 ASAP2O43150 1006 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 GTPBP6O43824 516 aaPredicted RBP20.78■□□□□ 0.92
FAM49B-208ENST00000518344 USO1O60763 962 aaKnown RBP20.78■□□□□ 0.92
FAM49B-208ENST00000518344 SFPQP23246 707 aaKnown RBP eCLIP20.78■□□□□ 0.92
FAM49B-208ENST00000518344 GATMP50440 423 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 ATP2C1P98194 919 aaPredicted RBP20.78■□□□□ 0.92
FAM49B-208ENST00000518344 GRB10Q13322 594 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 CCDC85BQ15834 202 aaPredicted RBP20.78■□□□□ 0.92
FAM49B-208ENST00000518344 ECM1Q16610 540 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 PAN2Q504Q3 1202 aaKnown RBP20.78■□□□□ 0.92
FAM49B-208ENST00000518344 KRT79Q5XKE5 535 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 CATSPER4Q7RTX7 472 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 CRIPAKQ8N1N5 446 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 SNX29Q8TEQ0 813 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 ZNF689Q96CS4 500 aaPredicted RBP20.78■□□□□ 0.92
FAM49B-208ENST00000518344 IFT122Q9HBG6 1241 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 RNF216Q9NWF9 866 aaPredicted RBP20.78■□□□□ 0.92
FAM49B-208ENST00000518344 DBR1Q9UK59 544 aaKnown RBP20.78■□□□□ 0.92
FAM49B-208ENST00000518344 STK24Q9Y6E0 443 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 ADGRA3Q8IWK6 1321 aa20.78■□□□□ 0.92
FAM49B-208ENST00000518344 CDC25AP30304 524 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms