RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 PCDHA12Q9UN75 941 aa16.46■□□□□ 0.22
PCM1-204ENST00000517730 ZNF652Q9Y2D9 606 aa16.46■□□□□ 0.22
PCM1-204ENST00000517730 SMIM23A6NLE4 172 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 TULP1O00294 542 aaPredicted RBP16.45■□□□□ 0.22
PCM1-204ENST00000517730 CALUO43852 315 aaPredicted RBP16.45■□□□□ 0.22
PCM1-204ENST00000517730 PHF2O75151 1096 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 BAG3O95817 575 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
PCM1-204ENST00000517730 PPP1R18Q6NYC8 613 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 ZNF483Q8TF39 744 aaPredicted RBP16.45■□□□□ 0.22
PCM1-204ENST00000517730 HAS1Q92839 578 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 NAP1L4Q99733 375 aaKnown RBP16.45■□□□□ 0.22
PCM1-204ENST00000517730 SIX2Q9NPC8 291 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 GRHL1Q9NZI5 618 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 PPP1R9AQ9ULJ8 1098 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 SLC16A3O15427 465 aaKnown RBP16.45■□□□□ 0.22
PCM1-204ENST00000517730 WFS1O76024 890 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 KRT18P05783 430 aaKnown RBP16.45■□□□□ 0.22
PCM1-204ENST00000517730 CYP11B2P19099 503 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 KLRK1P26718 216 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 IFNAR2P48551 515 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 ATP11AP98196 1134 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 CHADLQ6NUI6 762 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 MIS18BP1Q6P0N0 1132 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 SH3RF3Q8TEJ3 882 aaPredicted RBP16.45■□□□□ 0.22
PCM1-204ENST00000517730 DYDC1Q8WWB3 177 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 GLG1Q92896 1179 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 EYA3Q99504 573 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 MTFR1LQ9H019 292 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 TAOK3Q9H2K8 898 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 SEMA4AQ9H3S1 761 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 KIAA1024Q9UPX6 916 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 ARL2BPQ9Y2Y0 163 aa16.45■□□□□ 0.22
PCM1-204ENST00000517730 E9PMD0 336 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 PDXKO00764 312 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 RARGP13631 454 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 PTGIRP43119 386 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
PCM1-204ENST00000517730 TNNI2P48788 182 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 GSTO1P78417 241 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 MAP2K1Q02750 393 aaPredicted RBP16.44■□□□□ 0.22
PCM1-204ENST00000517730 LMNB2Q03252 620 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 AUHQ13825 339 aaKnown RBP16.44■□□□□ 0.22
PCM1-204ENST00000517730 KNOP1Q1ED39 458 aaKnown RBP16.44■□□□□ 0.22
PCM1-204ENST00000517730 ERVK-5Q9HDB9 667 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 OSGEPQ9NPF4 335 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 PCYOX1Q9UHG3 505 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 SYNGAP1Q96PV0 1343 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 RIPK2O43353 540 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 SKAP2O75563 359 aaPredicted RBP16.44■□□□□ 0.22
PCM1-204ENST00000517730 GJB6O95452 261 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 RPL13P26373 211 aaKnown RBP16.44■□□□□ 0.22
PCM1-204ENST00000517730 MSH2P43246 934 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 PPP4CP60510 307 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 SARNPP82979 210 aaKnown RBP16.44■□□□□ 0.22
PCM1-204ENST00000517730 BLMHQ13867 455 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 LNX1Q8TBB1 728 aaPredicted RBP16.44■□□□□ 0.22
PCM1-204ENST00000517730 EPS8L3Q8TE67 593 aaKnown RBP16.44■□□□□ 0.22
PCM1-204ENST00000517730 SH3GL3Q99963 347 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 RXFP1Q9HBX9 757 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 GCNT4Q9P109 453 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 CD2APQ9Y5K6 639 aa16.44■□□□□ 0.22
PCM1-204ENST00000517730 GGPS1O95749 300 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 KRT13P13646 458 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 ATP2A2P16615 1042 aaKnown RBP16.43■□□□□ 0.22
PCM1-204ENST00000517730 ATP5DP30049 168 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 SKIV2L2P42285 1042 aaKnown RBP16.43■□□□□ 0.22
PCM1-204ENST00000517730 DCAF17Q5H9S7 520 aaPredicted RBP16.43■□□□□ 0.22
PCM1-204ENST00000517730 TRIM7Q9C029 511 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 TFCP2L1Q9NZI6 479 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 NPHP3-ACAD11A0A0J9YXS1 232 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 MIF4GDA9UHW6 222 aaKnown RBP16.43■□□□□ 0.22
PCM1-204ENST00000517730 KRT16P08779 473 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 VCAM1P19320 739 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 SF3A3Q12874 501 aaKnown RBP eCLIP16.43■□□□□ 0.22
PCM1-204ENST00000517730 MKRN3Q13064 507 aaKnown RBP16.43■□□□□ 0.22
PCM1-204ENST00000517730 ERFEQ4G0M1 354 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 BARGINQ6ZT62 677 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 BRINP3Q76B58 766 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 ASRGL1Q7L266 308 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 MICAL1Q8TDZ2 1067 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 CCDC113Q9H0I3 377 aa16.43■□□□□ 0.22
PCM1-204ENST00000517730 SNED1Q8TER0 1413 aa16.42■□□□□ 0.22
PCM1-204ENST00000517730 EVI5O60447 810 aa16.42■□□□□ 0.22
PCM1-204ENST00000517730 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
PCM1-204ENST00000517730 SOX5P35711 763 aa16.42■□□□□ 0.22
PCM1-204ENST00000517730 CDK8P49336 464 aa16.42■□□□□ 0.22
PCM1-204ENST00000517730 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
PCM1-204ENST00000517730 C3orf67Q6ZVT6 689 aa16.42■□□□□ 0.22
PCM1-204ENST00000517730 C16orf86Q6ZW13 317 aa16.42■□□□□ 0.22
PCM1-204ENST00000517730 SPATA21Q7Z572 469 aa16.42■□□□□ 0.22
PCM1-204ENST00000517730 TEX9Q8N6V9 391 aa16.42■□□□□ 0.22
PCM1-204ENST00000517730 CELF1Q92879 486 aaKnown RBP16.42■□□□□ 0.22
PCM1-204ENST00000517730 COA7Q96BR5 231 aa16.42■□□□□ 0.22
PCM1-204ENST00000517730 UBA5Q9GZZ9 404 aa16.42■□□□□ 0.22
PCM1-204ENST00000517730 AJAP1Q9UKB5 411 aaPredicted RBP16.42■□□□□ 0.22
PCM1-204ENST00000517730 TCP11X1B4DZS4 312 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms