RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 LPPQ93052 612 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 AJUBAQ96IF1 538 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 PCGF6Q9BYE7 350 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 OSBPL6Q9BZF3 934 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 TRIM8Q9BZR9 551 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 KATNBL1Q9H079 304 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 TMEM168Q9H0V1 697 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 MTG2Q9H4K7 406 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 BARX1Q9HBU1 254 aaPredicted RBP4.11□□□□□ -1.75
SKP1-203ENST00000517625 CCM2LQ9NUG4 571 aaPredicted RBP4.11□□□□□ -1.75
SKP1-203ENST00000517625 POLR3BQ9NW08 1133 aaPredicted RBP4.11□□□□□ -1.75
SKP1-203ENST00000517625 PCDHB6Q9Y5E3 794 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 MRFAP1Q9Y605 127 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 MYPNQ86TC9 1320 aa4.11□□□□□ -1.75
SKP1-203ENST00000517625 PRSS38A1L453 326 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 FFAR3O14843 346 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 NUAK1O60285 661 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 ALDH1L1O75891 902 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 APOL3O95236 402 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 C8AP07357 584 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 XPAP23025 273 aaPredicted RBP4.1□□□□□ -1.75
SKP1-203ENST00000517625 MLLT6P55198 1093 aaPredicted RBP4.1□□□□□ -1.75
SKP1-203ENST00000517625 CD83Q01151 205 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 MEF2AQ02078 507 aaPredicted RBP4.1□□□□□ -1.75
SKP1-203ENST00000517625 NOLC1Q14978 699 aaKnown RBP eCLIP4.1□□□□□ -1.75
SKP1-203ENST00000517625 ZNF827Q17R98 1081 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 TMEM240Q5SV17 173 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 ODR4Q5SWX8 454 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 Q6ZUG5 572 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 OTOP2Q7RTS6 562 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 ZBTB46Q86UZ6 589 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 FAM124AQ86V42 546 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 GLB1L2Q8IW92 636 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 C1orf162Q8NEQ5 155 aaPredicted RBP4.1□□□□□ -1.75
SKP1-203ENST00000517625 ZSCAN18Q8TBC5 510 aaPredicted RBP4.1□□□□□ -1.75
SKP1-203ENST00000517625 AUTS2Q8WXX7 1259 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 GFM2Q969S9 779 aaKnown RBP4.1□□□□□ -1.75
SKP1-203ENST00000517625 SEMA4AQ9H3S1 761 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 TCF7L1Q9HCS4 588 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 VTA1Q9NP79 307 aa4.1□□□□□ -1.75
SKP1-203ENST00000517625 LUC7LQ9NQ29 371 aaKnown RBP4.1□□□□□ -1.75
SKP1-203ENST00000517625 ZNF277Q9NRM2 450 aaPredicted RBP4.1□□□□□ -1.75
SKP1-203ENST00000517625 SAE1Q9UBE0 346 aaPredicted RBP4.1□□□□□ -1.75
SKP1-203ENST00000517625 DDX3XO00571 662 aaKnown RBP eCLIP4.09□□□□□ -1.75
SKP1-203ENST00000517625 SEC24DO94855 1032 aaPredicted RBP4.09□□□□□ -1.75
SKP1-203ENST00000517625 HMGCRP04035 888 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 VCAM1P19320 739 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 GPR3P46089 330 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 MTNR1BP49286 362 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 SCAND1P57086 179 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 KIAA2012Q0VF49 1180 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 TTF1Q15361 905 aaPredicted RBP4.09□□□□□ -1.75
SKP1-203ENST00000517625 ZMAT1Q5H9K5 638 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 PITRM1Q5JRX3 1037 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 TRIM68Q6AZZ1 485 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 CCDC62Q6P9F0 684 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 KLHDC10Q6PID8 442 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 KCNK18Q7Z418 384 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 PLEKHH3Q7Z736 793 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 STK32CQ86UX6 486 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 PPP1R14CQ8TAE6 165 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 ADAMTS17Q8TE56 1095 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 ZNF526Q8TF50 670 aaPredicted RBP4.09□□□□□ -1.75
SKP1-203ENST00000517625 FUBP3Q96I24 572 aaKnown RBP eCLIP4.09□□□□□ -1.75
SKP1-203ENST00000517625 DYDC2Q96IM9 177 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 LCORQ96JN0 433 aaPredicted RBP4.09□□□□□ -1.75
SKP1-203ENST00000517625 SYT3Q9BQG1 590 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 NOL10Q9BSC4 688 aaKnown RBP4.09□□□□□ -1.75
SKP1-203ENST00000517625 CARD11Q9BXL7 1154 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 KCTD10Q9H3F6 313 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 MS4A5Q9H3V2 200 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 MKS1Q9NXB0 559 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 PRSS50Q9UI38 385 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 ADAM29Q9UKF5 820 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 TMPRSS11EQ9UL52 423 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 CDY2AQ9Y6F7 541 aa4.09□□□□□ -1.75
SKP1-203ENST00000517625 DBX1A6NMT0 343 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 FZD9O00144 591 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 H2AFYO75367 372 aaKnown RBP4.08□□□□□ -1.76
SKP1-203ENST00000517625 FSBPO95073 299 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 CYP1A1P04798 512 aaPredicted RBP4.08□□□□□ -1.76
SKP1-203ENST00000517625 MYBL2P10244 700 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 AGXTP21549 392 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 IARSP41252 1262 aaKnown RBP4.08□□□□□ -1.76
SKP1-203ENST00000517625 RECQLP46063 649 aaPredicted RBP4.08□□□□□ -1.76
SKP1-203ENST00000517625 MEOX1P50221 254 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 GJA9P57773 515 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 PPARAQ07869 468 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 PIN1Q13526 163 aaPredicted RBP4.08□□□□□ -1.76
SKP1-203ENST00000517625 USP10Q14694 798 aaKnown RBP4.08□□□□□ -1.76
SKP1-203ENST00000517625 MUM1Q2TAK8 710 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 ZNF568Q3ZCX4 644 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 MBNL2Q5VZF2 373 aaKnown RBP4.08□□□□□ -1.76
SKP1-203ENST00000517625 BORAQ6PGQ7 559 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 SLC41A1Q8IVJ1 513 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 UNC5BQ8IZJ1 945 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 TXNDC5Q8NBS9 432 aaKnown RBP4.08□□□□□ -1.76
SKP1-203ENST00000517625 NUDT10Q8NFP7 164 aa4.08□□□□□ -1.76
SKP1-203ENST00000517625 NUDT11Q96G61 164 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms