RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 RASSF8Q8NHQ8 419 aa15.87■□□□□ 0.13
NUP54-216ENST00000514901 TMEM143Q96AN5 459 aa15.87■□□□□ 0.13
NUP54-216ENST00000514901 IFIH1Q9BYX4 1025 aaKnown RBP15.87■□□□□ 0.13
NUP54-216ENST00000514901 BHMT2Q9H2M3 363 aa15.87■□□□□ 0.13
NUP54-216ENST00000514901 ADAMTS10Q9H324 1103 aa15.87■□□□□ 0.13
NUP54-216ENST00000514901 CCDC39Q9UFE4 941 aa15.87■□□□□ 0.13
NUP54-216ENST00000514901 RCOR1Q9UKL0 485 aa15.87■□□□□ 0.13
NUP54-216ENST00000514901 CIZ1Q9ULV3 898 aaPredicted RBP15.87■□□□□ 0.13
NUP54-216ENST00000514901 GINS2Q9Y248 185 aa15.87■□□□□ 0.13
NUP54-216ENST00000514901 GPR182O15218 404 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 CUTAO60888 179 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 GRB10Q13322 594 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 DRP2Q13474 957 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 TMEM119Q4V9L6 283 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 RHPN2Q8IUC4 686 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 PRPF31Q8WWY3 499 aaKnown RBP15.86■□□□□ 0.13
NUP54-216ENST00000514901 NLRP7Q8WX94 980 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 SCLT1Q96NL6 688 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 CLIC6Q96NY7 704 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 PNMA5Q96PV4 448 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 FTHL17Q9BXU8 183 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 GCOM2Q9BZD3 368 aaPredicted RBP15.86■□□□□ 0.13
NUP54-216ENST00000514901 INO80BQ9C086 356 aaPredicted RBP15.86■□□□□ 0.13
NUP54-216ENST00000514901 XPNPEP1Q9NQW7 623 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 COL4A3BPQ9Y5P4 624 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 SLC4A7Q9Y6M7 1214 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 MYH15Q9Y2K3 1946 aa15.86■□□□□ 0.13
NUP54-216ENST00000514901 ZBBXA8MT70 800 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 E9PMD0 336 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 USO1O60763 962 aaKnown RBP15.85■□□□□ 0.13
NUP54-216ENST00000514901 RPS6KA5O75582 802 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 EIF4BP23588 611 aaKnown RBP15.85■□□□□ 0.13
NUP54-216ENST00000514901 ARL2P36404 184 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 POU5F1BQ06416 359 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 PAK2Q13177 524 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 TFDP1Q14186 410 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 PHOSPHO2Q8TCD6 241 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 SYMPKQ92797 1274 aaKnown RBP15.85■□□□□ 0.13
NUP54-216ENST00000514901 EPSTI1Q96J88 318 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 OSMRQ99650 979 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 TIPINQ9BVW5 301 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 SCAND2PQ9GZW5 306 aaPredicted RBP15.85■□□□□ 0.13
NUP54-216ENST00000514901 AGO3Q9H9G7 860 aaKnown RBP15.85■□□□□ 0.13
NUP54-216ENST00000514901 CDHR5Q9HBB8 845 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 KCND2Q9NZV8 630 aa15.85■□□□□ 0.13
NUP54-216ENST00000514901 LOXHD1Q8IVV2 1947 aa15.84■□□□□ 0.13
NUP54-216ENST00000514901 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.84■□□□□ 0.13
NUP54-216ENST00000514901 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.84■□□□□ 0.13
NUP54-216ENST00000514901 DARSP14868 501 aaKnown RBP15.84■□□□□ 0.13
NUP54-216ENST00000514901 NCLP19338 710 aaKnown RBP15.84■□□□□ 0.13
NUP54-216ENST00000514901 KCNJ6P48051 423 aa15.84■□□□□ 0.13
NUP54-216ENST00000514901 ME1P48163 572 aa15.84■□□□□ 0.13
NUP54-216ENST00000514901 LAMTOR4Q0VGL1 99 aa15.84■□□□□ 0.13
NUP54-216ENST00000514901 HABP4Q5JVS0 413 aaKnown RBP15.84■□□□□ 0.13
NUP54-216ENST00000514901 SYT2Q8N9I0 419 aaPredicted RBP15.84■□□□□ 0.13
NUP54-216ENST00000514901 PADI3Q9ULW8 664 aa15.84■□□□□ 0.13
NUP54-216ENST00000514901 NOC2LQ9Y3T9 749 aaKnown RBP15.84■□□□□ 0.13
NUP54-216ENST00000514901 PLA2G4BP0C869 781 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 SRGAP2CP0DJJ0 459 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 PLCG1P19174 1290 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 CD52P31358 61 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 KARSQ15046 597 aaKnown RBP15.83■□□□□ 0.12
NUP54-216ENST00000514901 PCBP1Q15365 356 aaKnown RBP eCLIP15.83■□□□□ 0.12
NUP54-216ENST00000514901 SPECC1Q5M775 1068 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 FAM102BQ5T8I3 360 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 RRAGBQ5VZM2 374 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 RINT1Q6NUQ1 792 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 CCDC73Q6ZRK6 1079 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 KCNK18Q7Z418 384 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 SRGAP1Q7Z6B7 1085 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 KIFAP3Q92845 792 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 SPATA32Q96LK8 384 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 NLRP4Q96MN2 994 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 PPP1R16BQ96T49 567 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 SLC9A7Q96T83 725 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 PLIN2Q99541 437 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 OSBPL7Q9BZF2 842 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 ERVK-5Q9HDB9 667 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 BMP2KQ9NSY1 1161 aaPredicted RBP15.83■□□□□ 0.12
NUP54-216ENST00000514901 CXXC1Q9P0U4 656 aaPredicted RBP15.83■□□□□ 0.12
NUP54-216ENST00000514901 STK17AQ9UEE5 414 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 KCNG1Q9UIX4 513 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 ST3GAL5Q9UNP4 418 aa15.83■□□□□ 0.12
NUP54-216ENST00000514901 ARID2Q68CP9 1835 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 A0A087WZ62 844 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 AMHP03971 560 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 SSBP05455 408 aaKnown RBP eCLIP15.82■□□□□ 0.12
NUP54-216ENST00000514901 ATP2A2P16615 1042 aaKnown RBP15.82■□□□□ 0.12
NUP54-216ENST00000514901 SFPQP23246 707 aaKnown RBP eCLIP15.82■□□□□ 0.12
NUP54-216ENST00000514901 GUCY2CP25092 1073 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 PHKA2P46019 1235 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 SLC12A3P55017 1021 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 NFX1Q12986 1120 aaKnown RBP15.82■□□□□ 0.12
NUP54-216ENST00000514901 PPP2R5AQ15172 486 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 AXDND1Q5T1B0 1012 aaPredicted RBP15.82■□□□□ 0.12
NUP54-216ENST00000514901 C1orf186Q6ZWK4 172 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 USP49Q70CQ1 688 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 FAM228AQ86W67 206 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 KSR1Q8IVT5 923 aa15.82■□□□□ 0.12
NUP54-216ENST00000514901 RNF149Q8NC42 400 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms