RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	CTDP1	Q9Y5B0	961 aa	Predicted RBP	6.05	□□□□□ -1.44
MATR3-223	ENST00000514402	TLDC2	A0PJX2	215 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	MATN2	O00339	956 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	CDC14B	O60729	498 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	SCNN1B	P51168	640 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	STAT5B	P51692	787 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	KPNA1	P52294	538 aa	Predicted RBP	6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	PHC1	P78364	1004 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	DUSP8	Q13202	625 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	DHX37	Q8IY37	1157 aa	Known RBP	6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	OR2W6P	Q8NHA6	318 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	EDA	Q92838	391 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	GNRHR2	Q96P88	292 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	PITHD1	Q9GZP4	211 aa	Predicted RBP	6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	DENND2A	Q9ULE3	1009 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	SYNPO2	Q9UMS6	1093 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	MAPRE3	Q9UPY8	281 aa		6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	TMA7	Q9Y2S6	64 aa	Known RBP	6.04	□□□□□ -1.44
MATR3-223	ENST00000514402	MUSK	O15146	869 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	SLC26A4	O43511	780 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	FOXS1	O43638	330 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	COMT	P21964	271 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	LSS	P48449	732 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	SMAD3	P84022	425 aa	Known RBP	6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	ADCY2	Q08462	1091 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	MYBPC3	Q14896	1274 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	R3HDM1	Q15032	1099 aa	Known RBP	6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	C21orf62-AS1	Q17RA5	79 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	KIAA1841	Q6NSI8	718 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	FUK	Q8N0W3	1084 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	SMC1B	Q8NDV3	1235 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	CHTF18	Q8WVB6	975 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	NKD2	Q969F2	451 aa	Predicted RBP	6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	WWC2-AS2	Q96NR7	200 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	C12orf65	Q9H3J6	166 aa	Known RBP	6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	ZMAT4	Q9H898	229 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	POLR3B	Q9NW08	1133 aa	Predicted RBP	6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	FAM184B	Q9ULE4	1060 aa		6.03	□□□□□ -1.44
MATR3-223	ENST00000514402	ZNF891	A8MT65	544 aa	Predicted RBP	6.02	□□□□□ -1.45
MATR3-223	ENST00000514402	GSG1L2	A8MUP6	293 aa		6.02	□□□□□ -1.45
MATR3-223	ENST00000514402	NOLC1	Q14978	699 aa	Known RBP eCLIP	6.02	□□□□□ -1.45
MATR3-223	ENST00000514402	PCBP1	Q15365	356 aa	Known RBP eCLIP	6.02	□□□□□ -1.45
MATR3-223	ENST00000514402	ZNF585A	Q6P3V2	769 aa		6.02	□□□□□ -1.45
MATR3-223	ENST00000514402	NXPE1	Q8N323	547 aa		6.02	□□□□□ -1.45
MATR3-223	ENST00000514402	RABGGTA	Q92696	567 aa		6.02	□□□□□ -1.45
MATR3-223	ENST00000514402	DPYSL5	Q9BPU6	564 aa		6.02	□□□□□ -1.45
MATR3-223	ENST00000514402	PLA2G12B	Q9BX93	195 aa		6.02	□□□□□ -1.45
MATR3-223	ENST00000514402	SLC6A15	Q9H2J7	730 aa		6.02	□□□□□ -1.45
MATR3-223	ENST00000514402	THG1L	Q9NWX6	298 aa	Known RBP	6.02	□□□□□ -1.45
MATR3-223	ENST00000514402		A0A087X0B3	334 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402		A0A0A6YYJ9	748 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	PDE8A	O60658	829 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	PRPF6	O94906	941 aa	Known RBP	6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	INSRR	P14616	1297 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	HSD3B2	P26439	372 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	LSP1	P33241	339 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	PRKD1	Q15139	912 aa	Predicted RBP	6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	CDSN	Q15517	529 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	MAN2A1	Q16706	1144 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	GAGE13	Q4V321	117 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	ADGRE4P	Q86SQ3	457 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	GGN	Q86UU5	652 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	C11orf74	Q86VG3	221 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	FAM89A	Q96GI7	184 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	DYDC2	Q96IM9	177 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	WDR92	Q96MX6	357 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	OSBPL6	Q9BZF3	934 aa		6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	SLK	Q9H2G2	1235 aa	Predicted RBP	6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	H2AFY2	Q9P0M6	372 aa	Predicted RBP	6.01	□□□□□ -1.45
MATR3-223	ENST00000514402	TGM5	O43548	720 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	ADCY7	P51828	1080 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	ADAM15	Q13444	863 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	DHCR24	Q15392	516 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	SEPT7	Q16181	437 aa	Known RBP	6	□□□□□ -1.45
MATR3-223	ENST00000514402	ESPNL	Q6ZVH7	1005 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	ZNF610	Q8N9Z0	462 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	SHCBP1	Q8NEM2	672 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	OR14K1	Q8NGZ2	314 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	GCDH	Q92947	438 aa	Predicted RBP	6	□□□□□ -1.45
MATR3-223	ENST00000514402	OR14A2	Q96R54	314 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	MPHOSPH9	Q99550	1183 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	WNT8A	Q9H1J5	351 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	TMX1	Q9H3N1	280 aa		6	□□□□□ -1.45
MATR3-223	ENST00000514402	DAPK3	O43293	454 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	OPHN1	O60890	802 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	FKBP9	O95302	570 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	TNFRSF1A	P19438	455 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	GYS2	P54840	703 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	ANTXR2	P58335	489 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	IL2	P60568	153 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	CCDC178	Q5BJE1	867 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	MAMDC4	Q6UXC1	1216 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	FKBP9P1	Q75LS8	142 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	RTF1	Q92541	710 aa	Known RBP	5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	HIST1H2AH	Q96KK5	128 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	HIST1H2AJ	Q99878	128 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	MYL10	Q9BUA6	226 aa		5.99	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms