RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 KLRC2P26717 231 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 ADCY1Q08828 1119 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 PPFIA1Q13136 1202 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 BMS1Q14692 1282 aaKnown RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 WTAPQ15007 396 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 MLF2Q15773 248 aaPredicted RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 SLC44A4Q53GD3 710 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 SH3PXD2AQ5TCZ1 1133 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 IER5Q5VY09 327 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 TCEAL6Q6IPX3 200 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 PROSER1Q86XN7 944 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 FAM160A2Q8N612 972 aaPredicted RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 IL31RAQ8NI17 732 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 STAMQ92783 540 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 TCEAL3Q969E4 200 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 TMEM169Q96HH4 297 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 DOCK6Q96HP0 2047 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 STRBPQ96SI9 672 aaKnown RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 ATP6V0A4Q9HBG4 840 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 MRS2Q9HD23 443 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 FAM217BQ9NTX9 383 aaPredicted RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 NDRG2Q9UN36 371 aaKnown RBP3.79□□□□□ -1.8
CHD1-211ENST00000514344 MYO9AB2RTY4 2548 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 BOD1L1Q8NFC6 3051 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 CLUHO75153 1309 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 IGSF9BQ9UPX0 1349 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 ABCA12Q86UK0 2595 aa3.79□□□□□ -1.8
CHD1-211ENST00000514344 C2CD2LO14523 706 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 RANBP6O60518 1105 aaKnown RBP3.78□□□□□ -1.8
CHD1-211ENST00000514344 ZC3H11AO75152 810 aaKnown RBP eCLIP3.78□□□□□ -1.82e-6■■■■□ 20.5
CHD1-211ENST00000514344 SPATA31D3P0C874 917 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 HOXA13P31271 388 aaPredicted RBP3.78□□□□□ -1.8
CHD1-211ENST00000514344 HOXC13P31276 330 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 ALDH7A1P49419 539 aaKnown RBP3.78□□□□□ -1.8
CHD1-211ENST00000514344 C19orf57Q0VDD7 668 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 GRIK4Q16099 956 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 RNF43Q68DV7 783 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 PARM1Q6UWI2 310 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 C15orf39Q6ZRI6 1047 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 SPATA31D4Q6ZUB0 917 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 TPRG1Q6ZUI0 275 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 SLC24A5Q71RS6 500 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 CEP68Q76N32 757 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 GLIS3Q8NEA6 775 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 FAM126AQ9BYI3 521 aaPredicted RBP3.78□□□□□ -1.8
CHD1-211ENST00000514344 UBA5Q9GZZ9 404 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 WDR6Q9NNW5 1121 aaKnown RBP3.78□□□□□ -1.8
CHD1-211ENST00000514344 SLC2A4RGQ9NR83 387 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 KLK13Q9UKR3 277 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 PLIN4Q96Q06 1357 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 CHURC1-FNTBB4DL54 471 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 HSPD1P10809 573 aaKnown RBP3.78□□□□□ -1.8
CHD1-211ENST00000514344 FNTBP49356 437 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 LIMK1P53667 647 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 NRLP54845 237 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 HTR4Q13639 388 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 UBE3CQ15386 1083 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 MARCH8Q5T0T0 291 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 BTNL9Q6UXG8 535 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 FAM9BQ8IZU0 186 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 LRRC43Q8N309 656 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 SLC22A17Q8WUG5 538 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 DCAF4Q8WV16 495 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 TRAPPC12Q8WVT3 735 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 TMEM40Q8WWA1 233 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 SMG7Q92540 1137 aaKnown RBP3.78□□□□□ -1.8
CHD1-211ENST00000514344 FRAT1Q92837 279 aaPredicted RBP3.78□□□□□ -1.8
CHD1-211ENST00000514344 PDCD2LQ9BRP1 358 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 PIDD1Q9HB75 910 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 PRMT8Q9NR22 394 aaPredicted RBP3.78□□□□□ -1.8
CHD1-211ENST00000514344 MAN1C1Q9NR34 630 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 HEBP1Q9NRV9 189 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 TOMM22Q9NS69 142 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 EPS15L1Q9UBC2 864 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 SPAG17Q6Q759 2223 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 LAMA4Q16363 1823 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 URB1O60287 2271 aaKnown RBP3.78□□□□□ -1.8
CHD1-211ENST00000514344 GREB1Q4ZG55 1949 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 WDR19Q8NEZ3 1342 aa3.78□□□□□ -1.8
CHD1-211ENST00000514344 C4orf47A7E2U8 309 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 C9IYK1 514 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 PYCARD-AS1I3L0S3 204 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 NCAM2O15394 837 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 DHX16O60231 1041 aaKnown RBP3.78□□□□□ -1.81
CHD1-211ENST00000514344 RPS6KA5O75582 802 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 CNPP09543 421 aaKnown RBP3.78□□□□□ -1.81
CHD1-211ENST00000514344 IFIT2P09913 472 aaKnown RBP3.78□□□□□ -1.81
CHD1-211ENST00000514344 PDHBP11177 359 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 TCF7P36402 384 aaPredicted RBP3.78□□□□□ -1.81
CHD1-211ENST00000514344 CLCN4P51793 760 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 LONRF3Q496Y0 759 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 KCNV1Q6PIU1 500 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 SLC39A11Q8N1S5 342 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 NXPE3Q969Y0 559 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 CASD1Q96PB1 797 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 DDX23Q9BUQ8 820 aaKnown RBP3.78□□□□□ -1.81
CHD1-211ENST00000514344 ZBP1Q9H171 429 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 CDHR5Q9HBB8 845 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 TMEM161AQ9NX61 479 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 RTEL1Q9NZ71 1219 aa3.78□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms